Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL034555.1-201ENST00000604816 211 ntBASIC1.29□□□□□ -2.2
CMC4P56277 RNU6-6P-201ENST00000606623 107 ntBASIC1.29□□□□□ -2.2
CMC4P56277 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CMC4P56277 MIR1248-201ENST00000629190 106 ntBASIC1.29□□□□□ -2.2
CMC4P56277 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
CMC4P56277 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CMC4P56277 RNU4-15P-201ENST00000362613 141 ntBASIC1.28□□□□□ -2.2
CMC4P56277 RNU6-1303P-201ENST00000364841 107 ntBASIC1.28□□□□□ -2.2
CMC4P56277 SNORA51.11-201ENST00000384442 131 ntBASIC1.28□□□□□ -2.2
CMC4P56277 SNORA67.5-201ENST00000391036 107 ntBASIC1.28□□□□□ -2.2
CMC4P56277 BTF3L4P2-201ENST00000392798 346 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.28□□□□□ -2.2
CMC4P56277 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.28□□□□□ -2.2
CMC4P56277 MTND1P23-201ENST00000416931 372 ntBASIC1.28□□□□□ -2.2
CMC4P56277 BX295541.1-201ENST00000417774 250 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AL117339.3-201ENST00000418733 162 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.28□□□□□ -2.2
CMC4P56277 AC078809.1-201ENST00000427601 140 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.28□□□□□ -2.2
CMC4P56277 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.28□□□□□ -2.2
CMC4P56277 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.28□□□□□ -2.2
CMC4P56277 PRPS1P1-201ENST00000445305 876 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.28□□□□□ -2.2
CMC4P56277 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.28□□□□□ -2.2
CMC4P56277 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.28□□□□□ -2.2
CMC4P56277 MTND3P7-201ENST00000474435 343 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.28□□□□□ -2.2
CMC4P56277 AC010486.2-201ENST00000505572 483 ntBASIC1.28□□□□□ -2.2
CMC4P56277 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.28□□□□□ -2.2
CMC4P56277 MTND3P5-201ENST00000512798 333 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.28□□□□□ -2.2
CMC4P56277 RNU6-965P-201ENST00000516721 96 ntBASIC1.28□□□□□ -2.2
CMC4P56277 MTCO2P4-201ENST00000517968 247 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.28□□□□□ -2.2
CMC4P56277 AP001893.2-201ENST00000526949 202 ntBASIC1.28□□□□□ -2.2
CMC4P56277 TRAV32-201ENST00000553993 340 ntBASIC1.28□□□□□ -2.2
CMC4P56277 MIR3683-201ENST00000580847 82 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.28□□□□□ -2.2
CMC4P56277 MIR4298-201ENST00000584380 73 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AL590229.1-201ENST00000603497 542 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC091805.2-201ENST00000603848 235 ntBASIC1.28□□□□□ -2.2
CMC4P56277 CYP2C61P-201ENST00000604072 290 ntBASIC1.28□□□□□ -2.2
CMC4P56277 Z84480.1-201ENST00000605131 311 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AP000654.2-201ENST00000605633 586 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AL022345.1-201ENST00000607292 135 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC091931.1-201ENST00000623488 728 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AC005609.4-201ENST00000625071 447 ntBASIC1.28□□□□□ -2.2
CMC4P56277 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.28□□□□□ -2.2
CMC4P56277 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
CMC4P56277 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
CMC4P56277 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
CMC4P56277 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CMC4P56277 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CMC4P56277 CBX3P1-201ENST00000325243 554 ntBASIC1.27□□□□□ -2.21
CMC4P56277 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CMC4P56277 RNU6-1120P-201ENST00000362988 108 ntBASIC1.27□□□□□ -2.21
CMC4P56277 SNORD32A-201ENST00000364805 84 ntBASIC1.27□□□□□ -2.21
CMC4P56277 RNU6-336P-201ENST00000364891 107 ntBASIC1.27□□□□□ -2.21
CMC4P56277 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CMC4P56277 RNU6-43P-201ENST00000384302 107 ntBASIC1.27□□□□□ -2.21
CMC4P56277 RNU6-456P-201ENST00000384493 107 ntBASIC1.27□□□□□ -2.21
CMC4P56277 MIR676-201ENST00000390702 67 ntBASIC1.27□□□□□ -2.21
CMC4P56277 SNORA48.1-201ENST00000390879 135 ntBASIC1.27□□□□□ -2.21
CMC4P56277 SNORA16.2-201ENST00000390991 127 ntBASIC1.27□□□□□ -2.21
CMC4P56277 SNORD70.1-201ENST00000391007 85 ntBASIC1.27□□□□□ -2.21
CMC4P56277 RNU11-3P-201ENST00000391111 133 ntBASIC1.27□□□□□ -2.21
CMC4P56277 MTCYBP2-201ENST00000407745 171 ntBASIC1.27□□□□□ -2.21
CMC4P56277 RNU6-293P-201ENST00000411259 106 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.27□□□□□ -2.21
CMC4P56277 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.27□□□□□ -2.21
CMC4P56277 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.27□□□□□ -2.21
CMC4P56277 MTND4P32-201ENST00000437189 1237 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AL031667.1-201ENST00000440222 725 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.27□□□□□ -2.21
CMC4P56277 KATNBL1P3-201ENST00000443475 909 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AL360221.1-201ENST00000445989 335 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AL035666.1-201ENST00000446195 348 ntBASIC1.27□□□□□ -2.21
CMC4P56277 C1DP4-201ENST00000455429 424 ntBASIC1.27□□□□□ -2.21
CMC4P56277 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.27□□□□□ -2.21
CMC4P56277 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.27□□□□□ -2.21
CMC4P56277 RPL23AP63-201ENST00000498752 471 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.27□□□□□ -2.21
CMC4P56277 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.27□□□□□ -2.21
CMC4P56277 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.27□□□□□ -2.21
CMC4P56277 AC104581.2-201ENST00000572227 430 ntBASIC1.27□□□□□ -2.21
CMC4P56277 MIR3913-1-201ENST00000577744 102 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.27□□□□□ -2.21
CMC4P56277 SNRPGP19-201ENST00000603826 189 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AC010900.2-201ENST00000604508 210 ntBASIC1.27□□□□□ -2.21
CMC4P56277 MIR6845-201ENST00000613182 61 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AC063943.3-201ENST00000615562 356 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AC097372.5-201ENST00000623665 376 ntBASIC1.27□□□□□ -2.21
CMC4P56277 AL390237.1-201ENST00000404226 1415 ntBASIC1.26□□□□□ -2.21
CMC4P56277 SNORD115-3-201ENST00000363100 82 ntBASIC1.26□□□□□ -2.21
CMC4P56277 Y_RNA.169-201ENST00000363745 96 ntBASIC1.26□□□□□ -2.21
CMC4P56277 Y_RNA.201-201ENST00000364052 96 ntBASIC1.26□□□□□ -2.21
CMC4P56277 Y_RNA.332-201ENST00000365271 113 ntBASIC1.26□□□□□ -2.21
CMC4P56277 MIR9-3-201ENST00000385084 90 ntBASIC1.26□□□□□ -2.21
CMC4P56277 AL357139.1-201ENST00000407792 426 ntBASIC1.26□□□□□ -2.21
CMC4P56277 RNA5SP338-201ENST00000410495 85 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms