Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC107399.1-201ENST00000451226 265 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 MTND4P17-201ENST00000470444 350 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 RPL30P12-201ENST00000474666 353 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 AL121594.1-201ENST00000475906 575 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.75□□□□□ -1.97
NR1H2P55055 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.75□□□□□ -1.97
NR1H2P55055 RN7SKP272-201ENST00000516988 232 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 RPS3AP23-202ENST00000574601 686 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 AL356575.1-201ENST00000603008 283 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 AL138963.2-201ENST00000605137 226 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NR1H2P55055 AC005046.1-201ENST00000608515 625 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.75□□□□□ -1.97
NR1H2P55055 AL159153.1-201ENST00000619688 317 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NR1H2P55055 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.75□□□□□ -1.97
NR1H2P55055 AC000403.1-201ENST00000613696 3585 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 MTND4P23-201ENST00000447723 1363 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AP000560.1-201ENST00000624150 1937 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 RNU1-35P-201ENST00000362782 153 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 Y_RNA.151-201ENST00000363566 112 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 RNU6-1141P-201ENST00000364520 107 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 Y_RNA.339-201ENST00000365325 102 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 RNU6-325P-201ENST00000411132 105 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AL030996.1-201ENST00000411430 235 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.74□□□□□ -1.97
NR1H2P55055 RPS3AP52-201ENST00000435639 297 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.74□□□□□ -1.97
NR1H2P55055 FTH1P25-201ENST00000447665 469 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 RPS3P1-201ENST00000456781 192 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.74□□□□□ -1.97
NR1H2P55055 RPL9P9-202ENST00000466501 579 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 RPL30P1-201ENST00000488676 339 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AC114801.2-201ENST00000503825 781 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AC022447.4-201ENST00000504053 364 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.74□□□□□ -1.97
NR1H2P55055 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.74□□□□□ -1.97
NR1H2P55055 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 AL132765.2-201ENST00000610812 351 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 MIR6128-201ENST00000615528 109 ntBASIC2.74□□□□□ -1.97
NR1H2P55055 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.74□□□□□ -1.97
NR1H2P55055 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NR1H2P55055 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NR1H2P55055 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NR1H2P55055 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NR1H2P55055 SNORD62.1-201ENST00000362541 86 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 SNORA71.1-201ENST00000364523 117 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 RNU6-1317P-201ENST00000364582 104 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NR1H2P55055 MIR95-201ENST00000385072 81 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H2P55055 AC008267.5-201ENST00000424928 265 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H2P55055 U8.21-201ENST00000459536 136 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H2P55055 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.73□□□□□ -1.97
NR1H2P55055 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.73□□□□□ -1.97
NR1H2P55055 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H2P55055 RAB11AP2-201ENST00000545905 639 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 FGF7P1-201ENST00000582820 288 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 UBL5P2-201ENST00000583788 219 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.73□□□□□ -1.97
NR1H2P55055 AL355297.2-201ENST00000604792 129 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 AC099654.5-201ENST00000636479 350 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 AC112487.2-201ENST00000637950 304 ntBASIC2.73□□□□□ -1.97
NR1H2P55055 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.73□□□□□ -1.97
NR1H2P55055 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NR1H2P55055 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NR1H2P55055 RNU6-306P-201ENST00000384617 107 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 MIR29B2-201ENST00000385055 81 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 RN7SKP158-201ENST00000410453 326 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 RNU6-1140P-201ENST00000410517 106 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 RNU2-41P-201ENST00000410991 178 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 RPL37P10-201ENST00000412884 288 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.72□□□□□ -1.97
NR1H2P55055 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H2P55055 AC078809.1-201ENST00000427601 140 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 AC022018.1-201ENST00000430685 241 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.72□□□□□ -1.97
NR1H2P55055 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H2P55055 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.72□□□□□ -1.97
NR1H2P55055 AC019193.3-201ENST00000609144 554 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 AL161423.1-201ENST00000613700 262 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 AC241585.2-209ENST00000638217 143 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 AL035425.3-201ENST00000564206 4996 ntBASIC2.72□□□□□ -1.97
NR1H2P55055 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NR1H2P55055 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H2P55055 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H2P55055 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
NR1H2P55055 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NR1H2P55055 RNU4-56P-201ENST00000364700 142 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 Y_RNA.474-201ENST00000384341 102 ntBASIC2.71□□□□□ -1.98
NR1H2P55055 RNU6-933P-201ENST00000384424 107 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms