Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 HMGN2P3-201ENST00000433603 273 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 HMGN2P5-201ENST00000436882 273 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.96□□□□□ -2.1
EFNA3P52797 MTND3P16-201ENST00000452205 344 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 MTCO3P38-201ENST00000468910 766 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 AC068781.1-201ENST00000488231 618 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.96□□□□□ -2.1
EFNA3P52797 SNORA31.23-201ENST00000517219 133 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 MTND4LP26-201ENST00000518144 282 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.96□□□□□ -2.1
EFNA3P52797 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 MIR5583-1-201ENST00000580941 59 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.96□□□□□ -2.1
EFNA3P52797 MIR4424-201ENST00000585257 86 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 AC107304.1-201ENST00000604229 296 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 AL121917.1-203ENST00000605534 577 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 SNORD14A-201ENST00000606526 91 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 MIR6132-201ENST00000622083 109 ntBASIC1.96□□□□□ -2.1
EFNA3P52797 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.96□□□□□ -2.1
EFNA3P52797 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
EFNA3P52797 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
EFNA3P52797 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.95□□□□□ -2.1
EFNA3P52797 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-37P-201ENST00000362692 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-78P-201ENST00000362897 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 Y_RNA.89-201ENST00000363031 102 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-11P-201ENST00000364234 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 Y_RNA.231-201ENST00000364358 102 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 Y_RNA.324-201ENST00000365165 102 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-25P-201ENST00000383873 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-1-201ENST00000383898 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-38P-201ENST00000384085 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-48P-201ENST00000384161 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-36P-201ENST00000384172 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-4P-201ENST00000384205 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-5P-201ENST00000384238 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-3P-201ENST00000384314 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-16P-201ENST00000384385 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-15P-201ENST00000384534 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-2-201ENST00000384627 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-29P-201ENST00000384637 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-9-201ENST00000384776 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-33P-201ENST00000384793 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNA5SP219-201ENST00000390940 113 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.95□□□□□ -2.1
EFNA3P52797 MIR1277-201ENST00000408536 78 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-373P-201ENST00000411247 98 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
EFNA3P52797 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.95□□□□□ -2.1
EFNA3P52797 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.95□□□□□ -2.1
EFNA3P52797 AC008267.5-201ENST00000424928 265 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-333P-201ENST00000459117 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RPL30P12-201ENST00000474666 353 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.95□□□□□ -2.1
EFNA3P52797 AC104435.1-201ENST00000483483 166 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.95□□□□□ -2.1
EFNA3P52797 AP001025.1-201ENST00000486139 332 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC018437.1-201ENST00000492214 406 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.95□□□□□ -2.1
EFNA3P52797 AF213884.2-201ENST00000510417 903 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-189P-201ENST00000516120 101 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AP005902.1-201ENST00000521358 186 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AL133241.1-201ENST00000556832 487 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AL138976.2-201ENST00000563989 694 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC010525.2-201ENST00000590920 195 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RPL30P11-203ENST00000598995 310 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC073410.2-201ENST00000603240 332 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AL355297.2-201ENST00000604792 129 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-6P-201ENST00000606623 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-91P-201ENST00000607774 107 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC096772.1-201ENST00000609146 564 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 AC009318.2-201ENST00000610917 651 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
EFNA3P52797 AC012640.5-201ENST00000623897 319 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 MIR219B-201ENST00000637023 88 ntBASIC1.95□□□□□ -2.1
EFNA3P52797 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
EFNA3P52797 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
EFNA3P52797 RNU6-212P-201ENST00000362642 104 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 RNU6-451P-201ENST00000362921 107 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 RNU5E-7P-201ENST00000365290 117 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
EFNA3P52797 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 POLHP1-201ENST00000411806 470 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 OR9R1P-201ENST00000412200 877 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.94□□□□□ -2.1
EFNA3P52797 ERLEC1P1-201ENST00000433806 578 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 USP9YP8-201ENST00000441913 500 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.94□□□□□ -2.1
EFNA3P52797 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.94□□□□□ -2.1
EFNA3P52797 Y_RNA.654-201ENST00000497848 106 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 AC008526.1-201ENST00000509149 338 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
EFNA3P52797 CENPUP1-201ENST00000526649 1202 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms