Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNA5SP76-201ENST00000516277 87 ntBASIC3.71□□□□□ -1.82
MRE11P49959 SNORD59.2-201ENST00000516873 68 ntBASIC3.71□□□□□ -1.82
MRE11P49959 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.71□□□□□ -1.82
MRE11P49959 AC004584.2-201ENST00000570407 410 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR5701-3-201ENST00000578890 82 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR3162-201ENST00000581818 82 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR5701-1-201ENST00000585138 82 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.71□□□□□ -1.82
MRE11P49959 VN1R91P-201ENST00000594377 169 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AC011373.1-201ENST00000607270 237 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR7851-201ENST00000610611 160 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR1244-1-201ENST00000612829 85 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR5701-2-201ENST00000615634 82 ntBASIC3.71□□□□□ -1.82
MRE11P49959 HMGB1P24-202ENST00000615653 685 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AC002076.2-201ENST00000617362 122 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AC006111.3-201ENST00000622137 383 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
MRE11P49959 MIR1244-3-201ENST00000635744 85 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR1244-2-201ENST00000636449 85 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR1244-4-202ENST00000636813 85 ntBASIC3.71□□□□□ -1.82
MRE11P49959 ZNF299P-201ENST00000406845 1804 ntBASIC3.71□□□□□ -1.82
MRE11P49959 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
MRE11P49959 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRE11P49959 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
MRE11P49959 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MRE11P49959 AL513477.1-202ENST00000417061 214 ntBASIC3.7□□□□□ -1.82
MRE11P49959 EIF4EP2-201ENST00000422816 654 ntBASIC3.7□□□□□ -1.82
MRE11P49959 USP9YP16-201ENST00000430287 407 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.7□□□□□ -1.82
MRE11P49959 PIGFP3-201ENST00000441918 722 ntBASIC3.7□□□□□ -1.82
MRE11P49959 HIGD1AP2-201ENST00000446367 280 ntBASIC3.7□□□□□ -1.82
MRE11P49959 OR2AQ1P-201ENST00000451972 200 ntBASIC3.7□□□□□ -1.82
MRE11P49959 USP9YP23-201ENST00000455085 407 ntBASIC3.7□□□□□ -1.82
MRE11P49959 U8.21-201ENST00000459536 136 ntBASIC3.7□□□□□ -1.82
MRE11P49959 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.7□□□□□ -1.82
MRE11P49959 AC132942.1-201ENST00000486753 483 ntBASIC3.7□□□□□ -1.82
MRE11P49959 RNY3P15-201ENST00000516297 97 ntBASIC3.7□□□□□ -1.82
MRE11P49959 SNORA31.19-201ENST00000517079 126 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AC022080.3-201ENST00000544433 482 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AC103996.1-201ENST00000555468 102 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.7□□□□□ -1.82
MRE11P49959 MIR5696-201ENST00000578474 85 ntBASIC3.7□□□□□ -1.82
MRE11P49959 MIR5004-201ENST00000579078 107 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AC006557.5-201ENST00000603126 811 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AC008121.1-201ENST00000603244 268 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AC004852.3-201ENST00000614131 326 ntBASIC3.7□□□□□ -1.82
MRE11P49959 AL161629.2-201ENST00000615347 275 ntBASIC3.7□□□□□ -1.82
MRE11P49959 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
MRE11P49959 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
MRE11P49959 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.7□□□□□ -1.82
MRE11P49959 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
MRE11P49959 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.7□□□□□ -1.82
MRE11P49959 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MRE11P49959 AC108206.1-201ENST00000570186 4159 ntBASIC3.69□□□□□ -1.82
MRE11P49959 CUL1P1-201ENST00000509510 2425 ntBASIC3.69□□□□□ -1.82
MRE11P49959 AL359693.1-201ENST00000614959 2407 ntBASIC3.69□□□□□ -1.82
MRE11P49959 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MRE11P49959 RNA5SP197-201ENST00000363357 119 ntBASIC3.69□□□□□ -1.82
MRE11P49959 Y_RNA.276-201ENST00000364732 109 ntBASIC3.69□□□□□ -1.82
MRE11P49959 RNU6-472P-201ENST00000384299 107 ntBASIC3.69□□□□□ -1.82
MRE11P49959 RNU6-713P-201ENST00000384761 107 ntBASIC3.69□□□□□ -1.82
MRE11P49959 MIR181B1-201ENST00000385240 110 ntBASIC3.69□□□□□ -1.82
MRE11P49959 RNU6-1077P-201ENST00000410506 102 ntBASIC3.69□□□□□ -1.82
MRE11P49959 RNA5SP229-201ENST00000410809 99 ntBASIC3.69□□□□□ -1.82
MRE11P49959 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.69□□□□□ -1.82
MRE11P49959 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.69□□□□□ -1.82
MRE11P49959 RPS12P18-201ENST00000442381 270 ntBASIC3.69□□□□□ -1.82
MRE11P49959 MTCO3P8-201ENST00000453691 755 ntBASIC3.69□□□□□ -1.82
MRE11P49959 RNU7-169P-201ENST00000459456 61 ntBASIC3.69□□□□□ -1.82
MRE11P49959 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.69□□□□□ -1.82
MRE11P49959 RN7SL499P-201ENST00000481141 276 ntBASIC3.69□□□□□ -1.82
MRE11P49959 RNU6-408P-201ENST00000515910 100 ntBASIC3.69□□□□□ -1.82
MRE11P49959 SNORA70.18-201ENST00000516696 98 ntBASIC3.69□□□□□ -1.82
MRE11P49959 AC144568.1-201ENST00000520139 137 ntBASIC3.69□□□□□ -1.82
MRE11P49959 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.69□□□□□ -1.82
MRE11P49959 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.69□□□□□ -1.82
MRE11P49959 AL645944.1-201ENST00000603857 493 ntBASIC3.69□□□□□ -1.82
MRE11P49959 MIR8076-201ENST00000611401 83 ntBASIC3.69□□□□□ -1.82
MRE11P49959 MIR6733-201ENST00000635723 61 ntBASIC3.69□□□□□ -1.82
MRE11P49959 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.69□□□□□ -1.82
MRE11P49959 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MRE11P49959 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MRE11P49959 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MRE11P49959 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
MRE11P49959 MTND5P9-201ENST00000503854 1755 ntBASIC3.68□□□□□ -1.82
MRE11P49959 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MRE11P49959 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MRE11P49959 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
MRE11P49959 RNU1-70P-201ENST00000362618 164 ntBASIC3.68□□□□□ -1.82
MRE11P49959 RNU6-595P-201ENST00000363944 107 ntBASIC3.68□□□□□ -1.82
MRE11P49959 Y_RNA.214-201ENST00000364201 112 ntBASIC3.68□□□□□ -1.82
MRE11P49959 RNU1-140P-201ENST00000365040 165 ntBASIC3.68□□□□□ -1.82
MRE11P49959 RNU6-166P-201ENST00000384371 107 ntBASIC3.68□□□□□ -1.82
MRE11P49959 Y_RNA.551-201ENST00000384661 102 ntBASIC3.68□□□□□ -1.82
MRE11P49959 AC009310.1-201ENST00000414414 451 ntBASIC3.68□□□□□ -1.82
MRE11P49959 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.68□□□□□ -1.82
MRE11P49959 TOMM20P4-201ENST00000427861 435 ntBASIC3.68□□□□□ -1.82
MRE11P49959 Z98949.2-201ENST00000440996 144 ntBASIC3.68□□□□□ -1.82
MRE11P49959 AC013470.1-201ENST00000453438 462 ntBASIC3.68□□□□□ -1.82
MRE11P49959 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms