Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX1P47902 AC009541.1-201ENST00000438279 2662 ntBASIC2.13□□□□□ -2.07
CDX1P47902 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CDX1P47902 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.13□□□□□ -2.07
CDX1P47902 AC062016.1-201ENST00000355719 319 ntBASIC2.13□□□□□ -2.07
CDX1P47902 RNU6-142P-201ENST00000384019 107 ntBASIC2.13□□□□□ -2.07
CDX1P47902 RNU6-192P-201ENST00000391253 100 ntBASIC2.13□□□□□ -2.07
CDX1P47902 RN7SKP61-201ENST00000410642 295 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.13□□□□□ -2.07
CDX1P47902 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX1P47902 USP9YP20-201ENST00000419224 558 ntBASIC2.13□□□□□ -2.07
CDX1P47902 UBE2V1P4-201ENST00000425374 344 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AL133396.1-201ENST00000432048 687 ntBASIC2.13□□□□□ -2.07
CDX1P47902 RPS12P2-201ENST00000439728 269 ntBASIC2.13□□□□□ -2.07
CDX1P47902 GPM6BP3-201ENST00000442797 145 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.13□□□□□ -2.07
CDX1P47902 IFNA11P-201ENST00000446352 526 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX1P47902 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX1P47902 AC007547.1-201ENST00000462177 490 ntBASIC2.13□□□□□ -2.07
CDX1P47902 HMGN2P26-201ENST00000463169 339 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC025465.4-201ENST00000513422 638 ntBASIC2.13□□□□□ -2.07
CDX1P47902 RNU6-667P-201ENST00000517186 102 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC034114.1-201ENST00000520293 285 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX1P47902 AC121758.2-201ENST00000553271 193 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX1P47902 MIR4319-201ENST00000577285 85 ntBASIC2.13□□□□□ -2.07
CDX1P47902 MIR5694-201ENST00000581190 76 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC006023.1-201ENST00000603944 259 ntBASIC2.13□□□□□ -2.07
CDX1P47902 AC018889.1-201ENST00000605372 397 ntBASIC2.13□□□□□ -2.07
CDX1P47902 CTHRC1P1-201ENST00000605383 469 ntBASIC2.13□□□□□ -2.07
CDX1P47902 MIR6852-201ENST00000621699 66 ntBASIC2.13□□□□□ -2.07
CDX1P47902 MIR3688-2-201ENST00000636963 87 ntBASIC2.13□□□□□ -2.07
CDX1P47902 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
CDX1P47902 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDX1P47902 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.12□□□□□ -2.07
CDX1P47902 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC092268.1-201ENST00000342691 405 ntBASIC2.12□□□□□ -2.07
CDX1P47902 RNU6-1317P-201ENST00000364582 104 ntBASIC2.12□□□□□ -2.07
CDX1P47902 RNU6-534P-201ENST00000364877 106 ntBASIC2.12□□□□□ -2.07
CDX1P47902 Y_RNA.530-201ENST00000384587 101 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AL162578.1-201ENST00000406202 378 ntBASIC2.12□□□□□ -2.07
CDX1P47902 FCF1P9-201ENST00000412546 282 ntBASIC2.12□□□□□ -2.07
CDX1P47902 EDDM3CP-201ENST00000415977 425 ntBASIC2.12□□□□□ -2.07
CDX1P47902 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX1P47902 MTND3P9-201ENST00000429526 346 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX1P47902 UBE2V1P8-201ENST00000437166 265 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX1P47902 SNORD109B-201ENST00000458961 67 ntBASIC2.12□□□□□ -2.07
CDX1P47902 SNORD109A-201ENST00000459128 67 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC018868.1-201ENST00000491307 315 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC145146.1-201ENST00000496370 254 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC114801.2-201ENST00000503825 781 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX1P47902 AC091874.1-201ENST00000511402 339 ntBASIC2.12□□□□□ -2.07
CDX1P47902 RNU6-965P-201ENST00000516721 96 ntBASIC2.12□□□□□ -2.07
CDX1P47902 SNORA31.16-201ENST00000516773 139 ntBASIC2.12□□□□□ -2.07
CDX1P47902 TRAV32-201ENST00000553993 340 ntBASIC2.12□□□□□ -2.07
CDX1P47902 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX1P47902 MIR3923-201ENST00000579521 83 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC100830.2-201ENST00000581636 240 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC104458.1-201ENST00000608243 463 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC068944.2-201ENST00000610373 403 ntBASIC2.12□□□□□ -2.07
CDX1P47902 FAM157A-202ENST00000615155 405 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX1P47902 MIR3662-201ENST00000637030 95 ntBASIC2.12□□□□□ -2.07
CDX1P47902 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CDX1P47902 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX1P47902 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
CDX1P47902 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDX1P47902 RNU4-15P-201ENST00000362613 141 ntBASIC2.11□□□□□ -2.07
CDX1P47902 RNU6-859P-201ENST00000362728 107 ntBASIC2.11□□□□□ -2.07
CDX1P47902 RNU6-227P-201ENST00000362865 103 ntBASIC2.11□□□□□ -2.07
CDX1P47902 Y_RNA.100-201ENST00000363141 102 ntBASIC2.11□□□□□ -2.07
CDX1P47902 RNU1-112P-201ENST00000364401 164 ntBASIC2.11□□□□□ -2.07
CDX1P47902 U8.8-201ENST00000365399 135 ntBASIC2.11□□□□□ -2.07
CDX1P47902 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDX1P47902 RNU6-128P-201ENST00000383976 107 ntBASIC2.11□□□□□ -2.07
CDX1P47902 RNU6-933P-201ENST00000384424 107 ntBASIC2.11□□□□□ -2.07
CDX1P47902 MIR196B-201ENST00000384852 84 ntBASIC2.11□□□□□ -2.07
CDX1P47902 VN1R36P-201ENST00000414936 291 ntBASIC2.11□□□□□ -2.07
CDX1P47902 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
CDX1P47902 AC009161.1-201ENST00000417306 376 ntBASIC2.11□□□□□ -2.07
CDX1P47902 RPL23AP95-201ENST00000426806 265 ntBASIC2.11□□□□□ -2.07
CDX1P47902 CBX3P6-201ENST00000430257 527 ntBASIC2.11□□□□□ -2.07
CDX1P47902 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX1P47902 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX1P47902 AC104564.1-201ENST00000493028 407 ntBASIC2.11□□□□□ -2.07
CDX1P47902 AC082651.2-201ENST00000496833 166 ntBASIC2.11□□□□□ -2.07
CDX1P47902 TRBVA-201ENST00000498804 316 ntBASIC2.11□□□□□ -2.07
CDX1P47902 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX1P47902 AC096725.1-201ENST00000514266 313 ntBASIC2.11□□□□□ -2.07
CDX1P47902 HSPE1P18-201ENST00000517602 280 ntBASIC2.11□□□□□ -2.07
CDX1P47902 AC022616.8-201ENST00000533569 253 ntBASIC2.11□□□□□ -2.07
CDX1P47902 AC079600.2-201ENST00000550076 130 ntBASIC2.11□□□□□ -2.07
CDX1P47902 AC026271.5-201ENST00000577873 130 ntBASIC2.11□□□□□ -2.07
CDX1P47902 MIR4513-201ENST00000581077 86 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms