Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SNORD116-20-201ENST00000384529 92 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 MIR627-201ENST00000384979 97 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 RNA5SP390-201ENST00000410191 113 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.28□□□□□ -2.04
NEDD4P46934 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD4P46934 HMGN2P3-201ENST00000433603 273 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 HMGN2P5-201ENST00000436882 273 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 FABP5P14-201ENST00000437273 393 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 RNU7-138P-201ENST00000459479 64 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 AP001324.2-201ENST00000461163 319 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 RPL7P43-201ENST00000478876 753 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 AC092989.1-201ENST00000481235 277 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD4P46934 RNA5SP112-201ENST00000515937 99 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 RNU6-377P-201ENST00000515965 102 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD4P46934 BTF3P12-201ENST00000519620 469 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 AC087854.1-201ENST00000519706 414 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD4P46934 MYL12BP1-201ENST00000569826 507 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD4P46934 SNORA59B-202ENST00000578183 701 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 AL158827.2-201ENST00000602494 330 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.28□□□□□ -2.04
NEDD4P46934 AL691447.3-201ENST00000635020 330 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 MIR7157-201ENST00000635801 60 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
NEDD4P46934 RNU6-486P-201ENST00000363116 107 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 RNU6-522P-201ENST00000364497 107 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 AL591043.1-201ENST00000432461 424 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 MTATP6P13-201ENST00000438531 667 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD4P46934 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD4P46934 RPS29P25-201ENST00000481709 171 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.27□□□□□ -2.05
NEDD4P46934 RPL36AP48-201ENST00000485521 314 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD4P46934 RNU6-1069P-201ENST00000516612 133 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 AC010186.2-204ENST00000537668 439 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 AC079598.5-201ENST00000547460 117 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD4P46934 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.27□□□□□ -2.05
NEDD4P46934 MIR5194-201ENST00000582634 120 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 MIR4448-201ENST00000584360 86 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 OR1M4P-201ENST00000589199 287 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 AC021646.1-201ENST00000605469 484 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 RNU6-85P-201ENST00000605989 107 ntBASIC2.27□□□□□ -2.05
NEDD4P46934 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.27□□□□□ -2.05
NEDD4P46934 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NEDD4P46934 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.27□□□□□ -2.05
NEDD4P46934 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.26□□□□□ -2.05
NEDD4P46934 Y_RNA.100-201ENST00000363141 102 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 Y_RNA.167-201ENST00000363735 109 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 RNU6-332P-201ENST00000391193 108 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD4P46934 RNU2-25P-201ENST00000411041 191 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD4P46934 AC097463.2-201ENST00000421074 142 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD4P46934 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.26□□□□□ -2.05
NEDD4P46934 AC124916.1-201ENST00000444020 547 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AC013470.1-201ENST00000453438 462 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD4P46934 HMGN2P26-201ENST00000463169 339 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AC018437.1-201ENST00000492214 406 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD4P46934 RPPH1-2P-201ENST00000516688 293 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 SNORA31.23-201ENST00000517219 133 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AC109329.1-201ENST00000518744 317 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.26□□□□□ -2.05
NEDD4P46934 AC110588.1-201ENST00000559699 137 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.26□□□□□ -2.05
NEDD4P46934 RPS15AP11-201ENST00000594193 385 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AP000907.4-201ENST00000604143 237 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 AC107304.1-201ENST00000604229 296 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 RMST_3.1-201ENST00000611651 109 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD4P46934 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.26□□□□□ -2.05
NEDD4P46934 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
NEDD4P46934 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 RBBP8P1-201ENST00000449447 1844 ntBASIC2.26□□□□□ -2.05
NEDD4P46934 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD4P46934 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
NEDD4P46934 RNU6-1010P-201ENST00000362757 107 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 SNORD114-19-201ENST00000363072 75 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 RNU6-527P-201ENST00000363425 104 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 Y_RNA.157-201ENST00000363638 102 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 RNU6-461P-201ENST00000364195 107 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 RNU6-1106P-201ENST00000390845 107 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 RNU6-1328P-201ENST00000410938 106 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.25□□□□□ -2.05
NEDD4P46934 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.25□□□□□ -2.05
NEDD4P46934 AC087884.1-201ENST00000469738 328 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.25□□□□□ -2.05
NEDD4P46934 RPL23AP70-201ENST00000483361 460 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 RPS29P11-201ENST00000496507 171 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 SNORA19.2-201ENST00000516013 114 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms