Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.77□□□□□ -2.29
RPL28P46779 AC084290.1-201ENST00000434995 374 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.77□□□□□ -2.29
RPL28P46779 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.77□□□□□ -2.29
RPL28P46779 AL133373.1-201ENST00000497098 94 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AC112204.1-201ENST00000502591 103 ntBASIC0.77□□□□□ -2.29
RPL28P46779 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.77□□□□□ -2.29
RPL28P46779 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.77□□□□□ -2.29
RPL28P46779 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.77□□□□□ -2.29
RPL28P46779 AC090115.3-201ENST00000553218 849 ntBASIC0.77□□□□□ -2.29
RPL28P46779 MIR3937-201ENST00000580135 106 ntBASIC0.77□□□□□ -2.29
RPL28P46779 MIR3136-201ENST00000583498 78 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AC073539.2-201ENST00000597113 165 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AC073413.2-201ENST00000604332 360 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AC069114.2-201ENST00000604699 304 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AC090578.1-201ENST00000604955 591 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AL353770.2-201ENST00000620024 78 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AC097372.5-201ENST00000623665 376 ntBASIC0.77□□□□□ -2.29
RPL28P46779 Z69720.2-201ENST00000624755 279 ntBASIC0.77□□□□□ -2.29
RPL28P46779 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.77□□□□□ -2.29
RPL28P46779 MTND5P35-201ENST00000557537 1720 ntBASIC0.77□□□□□ -2.29
RPL28P46779 AC010615.1-201ENST00000594254 1764 ntBASIC0.77□□□□□ -2.29
RPL28P46779 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
RPL28P46779 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
RPL28P46779 SNORA63D-201ENST00000364359 132 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNU6-61P-201ENST00000365528 109 ntBASIC0.76□□□□□ -2.29
RPL28P46779 SNORA70.7-201ENST00000384159 133 ntBASIC0.76□□□□□ -2.29
RPL28P46779 MIR194-1-201ENST00000384892 85 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNA5SP213-201ENST00000391031 106 ntBASIC0.76□□□□□ -2.29
RPL28P46779 SNORA12.2-201ENST00000391040 156 ntBASIC0.76□□□□□ -2.29
RPL28P46779 MTCYBP36-201ENST00000404146 440 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNU4-62P-201ENST00000410125 130 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNA5SP201-201ENST00000410316 124 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNU2-39P-201ENST00000410604 198 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RPL37P10-201ENST00000412884 288 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
RPL28P46779 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.76□□□□□ -2.29
RPL28P46779 AC243964.1-201ENST00000441814 261 ntBASIC0.76□□□□□ -2.29
RPL28P46779 SNRPEP8-201ENST00000442866 260 ntBASIC0.76□□□□□ -2.29
RPL28P46779 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.76□□□□□ -2.29
RPL28P46779 HMGN2P9-201ENST00000476875 229 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AL163540.1-201ENST00000485382 386 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.76□□□□□ -2.29
RPL28P46779 AC010587.1-201ENST00000505809 469 ntBASIC0.76□□□□□ -2.29
RPL28P46779 MTND3P25-201ENST00000509243 135 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AC079140.3-201ENST00000511111 550 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNA5SP481-201ENST00000516814 122 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNU6-685P-201ENST00000517088 95 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.76□□□□□ -2.29
RPL28P46779 AC087883.1-201ENST00000551882 391 ntBASIC0.76□□□□□ -2.29
RPL28P46779 CYP3A52P-201ENST00000563326 91 ntBASIC0.76□□□□□ -2.29
RPL28P46779 MIR4295-201ENST00000585286 85 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AC103810.9-201ENST00000606688 112 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AL157392.4-201ENST00000609756 345 ntBASIC0.76□□□□□ -2.29
RPL28P46779 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AL031667.3-201ENST00000620124 655 ntBASIC0.76□□□□□ -2.29
RPL28P46779 AL049777.1-201ENST00000622740 518 ntBASIC0.76□□□□□ -2.29
RPL28P46779 RNU6-1019P-201ENST00000364424 107 ntBASIC0.75□□□□□ -2.29
RPL28P46779 SNORA32.2-201ENST00000384049 122 ntBASIC0.75□□□□□ -2.29
RPL28P46779 RNA5SP111-201ENST00000411386 101 ntBASIC0.75□□□□□ -2.29
RPL28P46779 CYCSP33-201ENST00000414485 327 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC007283.2-201ENST00000424739 197 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC108667.1-201ENST00000428618 249 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC000111.3-201ENST00000433478 193 ntBASIC0.75□□□□□ -2.29
RPL28P46779 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.75□□□□□ -2.29
RPL28P46779 RPS24P1-201ENST00000438550 371 ntBASIC0.75□□□□□ -2.29
RPL28P46779 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.75□□□□□ -2.29
RPL28P46779 RNU7-95P-201ENST00000459222 64 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC004223.1-201ENST00000479840 271 ntBASIC0.75□□□□□ -2.29
RPL28P46779 RPS23P4-201ENST00000487908 423 ntBASIC0.75□□□□□ -2.29
RPL28P46779 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC117522.1-201ENST00000509821 380 ntBASIC0.75□□□□□ -2.29
RPL28P46779 RNA5SP458-201ENST00000516188 119 ntBASIC0.75□□□□□ -2.29
RPL28P46779 RNU5A-4P-201ENST00000516588 111 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.75□□□□□ -2.29
RPL28P46779 MTND4LP18-201ENST00000526864 291 ntBASIC0.75□□□□□ -2.29
RPL28P46779 MIR3660-201ENST00000584845 100 ntBASIC0.75□□□□□ -2.29
RPL28P46779 VN1R80P-201ENST00000597126 338 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC110760.3-201ENST00000598794 467 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AL355802.3-201ENST00000607571 545 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.75□□□□□ -2.29
RPL28P46779 AC104010.1-201ENST00000616889 150 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AL607023.1-201ENST00000620045 248 ntBASIC0.75□□□□□ -2.29
RPL28P46779 AL359740.1-201ENST00000624340 592 ntBASIC0.75□□□□□ -2.29
RPL28P46779 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.75□□□□□ -2.29
RPL28P46779 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RPL28P46779 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.74□□□□□ -2.29
RPL28P46779 AL391987.6-201ENST00000305671 199 ntBASIC0.74□□□□□ -2.29
RPL28P46779 Y_RNA.18-201ENST00000362461 102 ntBASIC0.74□□□□□ -2.29
RPL28P46779 Y_RNA.22-201ENST00000362492 102 ntBASIC0.74□□□□□ -2.29
RPL28P46779 RNA5SP99-201ENST00000364020 114 ntBASIC0.74□□□□□ -2.29
RPL28P46779 RNU6-1141P-201ENST00000364520 107 ntBASIC0.74□□□□□ -2.29
RPL28P46779 RNU6-660P-201ENST00000364566 109 ntBASIC0.74□□□□□ -2.29
RPL28P46779 RNU6-1065P-201ENST00000384513 106 ntBASIC0.74□□□□□ -2.29
RPL28P46779 MIR513A1-201ENST00000385138 129 ntBASIC0.74□□□□□ -2.29
RPL28P46779 RNU6-1176P-201ENST00000390955 107 ntBASIC0.74□□□□□ -2.29
RPL28P46779 RNU2-7P-201ENST00000410794 178 ntBASIC0.74□□□□□ -2.29
RPL28P46779 OR6C66P-201ENST00000414917 930 ntBASIC0.74□□□□□ -2.29
RPL28P46779 MTCO1P21-201ENST00000416634 589 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms