Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 SCARNA3-201ENST00000517097 143 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 RN7SKP40-201ENST00000517211 242 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 AC109479.2-201ENST00000517842 174 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC105029.1-201ENST00000520250 669 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC087241.2-201ENST00000535801 324 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.66□□□□□ -1.98
HOXA13P31271 AC025253.1-201ENST00000613623 543 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 MIR7157-201ENST00000635801 60 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HOXA13P31271 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
HOXA13P31271 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
HOXA13P31271 Y_RNA.100-201ENST00000363141 102 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 Y_RNA.263-201ENST00000364659 114 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 RNU1-51P-201ENST00000365345 176 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 Y_RNA.509-201ENST00000384506 99 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AL513475.1-201ENST00000406602 315 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 MTND3P8-201ENST00000412909 339 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA13P31271 RPL30P4-201ENST00000429309 333 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AC124916.1-201ENST00000444020 547 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXA13P31271 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA13P31271 SNRPGP7-201ENST00000469016 106 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 RPL30P12-201ENST00000474666 353 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AC140059.1-201ENST00000489238 361 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA13P31271 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA13P31271 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXA13P31271 AC025423.5-201ENST00000550230 219 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.65□□□□□ -1.99
HOXA13P31271 AL356280.1-201ENST00000603614 379 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AC116312.1-201ENST00000606841 314 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 RNU6-91P-201ENST00000607774 107 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 AL132765.2-201ENST00000610812 351 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HOXA13P31271 AC103705.1-201ENST00000619013 241 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 U4.7-201ENST00000638126 106 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
HOXA13P31271 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.65□□□□□ -1.99
HOXA13P31271 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXA13P31271 OR56A5-201ENST00000340110 738 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 RNU6-212P-201ENST00000362642 104 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 Y_RNA.61-201ENST00000362835 102 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 RNU6-428P-201ENST00000362942 107 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 U8.2-201ENST00000363156 134 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 RNU4-73P-201ENST00000363164 141 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 Y_RNA.166-201ENST00000363730 102 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 RNU6-827P-201ENST00000365553 106 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 Y_RNA.414-201ENST00000384011 101 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 SNORA70B-201ENST00000384210 135 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 AC018634.1-201ENST00000437554 401 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXA13P31271 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXA13P31271 MTND1P11-201ENST00000456661 876 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 RNU7-138P-201ENST00000459479 64 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 AC073901.1-201ENST00000462471 408 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 CKS1BP2-201ENST00000497342 240 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 RNU6-277P-201ENST00000516272 106 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 SNORA31.23-201ENST00000517219 133 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXA13P31271 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.64□□□□□ -1.99
HOXA13P31271 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXA13P31271 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.64□□□□□ -1.99
HOXA13P31271 AC069294.1-201ENST00000608397 350 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 AC093913.1-201ENST00000614178 329 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 TPTEP1-208ENST00000636884 213 ntBASIC2.64□□□□□ -1.99
HOXA13P31271 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA13P31271 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXA13P31271 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXA13P31271 Y_RNA.58-201ENST00000362807 102 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 Y_RNA.154-201ENST00000363624 102 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 Y_RNA.301-201ENST00000364990 103 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 RNY3P1-201ENST00000365085 102 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 RNY3-201ENST00000365484 102 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 Y_RNA.490-201ENST00000384413 102 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 SNORD73A-201ENST00000386062 65 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 EIF4E2P1-201ENST00000393781 255 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 RN7SKP223-201ENST00000410582 62 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 RNU4-14P-201ENST00000410858 122 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 AC009161.1-201ENST00000417306 376 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXA13P31271 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA13P31271 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 PPP1R2P5-201ENST00000457256 603 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 RPS27P27-201ENST00000498779 255 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 TRBVA-201ENST00000498804 316 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA13P31271 RNU6-864P-201ENST00000516256 108 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 AC087854.1-201ENST00000519706 414 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA13P31271 AC103996.1-201ENST00000555468 102 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 MIR5692C1-201ENST00000585309 91 ntBASIC2.63□□□□□ -1.99
HOXA13P31271 AC073410.2-201ENST00000603240 332 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms