Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP003122.5-201ENST00000527668 3766 ntBASIC4.51□□□□□ -1.69
RFX1P22670 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFX1P22670 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.51□□□□□ -1.69
RFX1P22670 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFX1P22670 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RFX1P22670 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFX1P22670 Y_RNA.40-201ENST00000362645 93 ntBASIC4.5□□□□□ -1.69
RFX1P22670 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.5□□□□□ -1.69
RFX1P22670 Y_RNA.180-201ENST00000363867 113 ntBASIC4.5□□□□□ -1.69
RFX1P22670 RNU6-740P-201ENST00000364734 105 ntBASIC4.5□□□□□ -1.69
RFX1P22670 Y_RNA.446-201ENST00000384178 104 ntBASIC4.5□□□□□ -1.69
RFX1P22670 MIR513A2-201ENST00000385249 127 ntBASIC4.5□□□□□ -1.69
RFX1P22670 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.5□□□□□ -1.69
RFX1P22670 RPL23AP48-201ENST00000406913 488 ntBASIC4.5□□□□□ -1.69
RFX1P22670 AC069285.2-201ENST00000440210 275 ntBASIC4.5□□□□□ -1.69
RFX1P22670 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.5□□□□□ -1.69
RFX1P22670 AC010469.1-201ENST00000463864 576 ntBASIC4.5□□□□□ -1.69
RFX1P22670 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFX1P22670 AC026470.2-201ENST00000561492 181 ntBASIC4.5□□□□□ -1.69
RFX1P22670 MIR4444-1-201ENST00000581696 74 ntBASIC4.5□□□□□ -1.69
RFX1P22670 MIR4444-2-201ENST00000584390 74 ntBASIC4.5□□□□□ -1.69
RFX1P22670 MZT1P2-201ENST00000604387 248 ntBASIC4.5□□□□□ -1.69
RFX1P22670 AC022441.3-201ENST00000605737 136 ntBASIC4.5□□□□□ -1.69
RFX1P22670 MIR6867-201ENST00000610636 67 ntBASIC4.5□□□□□ -1.69
RFX1P22670 PCGEM1.1-201ENST00000613431 131 ntBASIC4.5□□□□□ -1.69
RFX1P22670 AL590240.4-201ENST00000616908 390 ntBASIC4.5□□□□□ -1.69
RFX1P22670 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.5□□□□□ -1.69
RFX1P22670 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
RFX1P22670 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX1P22670 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
RFX1P22670 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFX1P22670 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RFX1P22670 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFX1P22670 Y_RNA.136-201ENST00000363444 102 ntBASIC4.49□□□□□ -1.69
RFX1P22670 MIR7-3-201ENST00000384898 110 ntBASIC4.49□□□□□ -1.69
RFX1P22670 YME1L1P1-201ENST00000429435 297 ntBASIC4.49□□□□□ -1.69
RFX1P22670 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX1P22670 RPS3P1-201ENST00000456781 192 ntBASIC4.49□□□□□ -1.69
RFX1P22670 Y_RNA.644-201ENST00000459006 113 ntBASIC4.49□□□□□ -1.69
RFX1P22670 Y_RNA.674-201ENST00000516362 113 ntBASIC4.49□□□□□ -1.69
RFX1P22670 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.49□□□□□ -1.69
RFX1P22670 AC079598.5-201ENST00000547460 117 ntBASIC4.49□□□□□ -1.69
RFX1P22670 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX1P22670 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.49□□□□□ -1.69
RFX1P22670 AL162424.1-201ENST00000602325 221 ntBASIC4.49□□□□□ -1.69
RFX1P22670 AL137843.1-201ENST00000605078 385 ntBASIC4.49□□□□□ -1.69
RFX1P22670 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.49□□□□□ -1.69
RFX1P22670 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.49□□□□□ -1.69
RFX1P22670 IGHVIII-44-202ENST00000636235 289 ntBASIC4.49□□□□□ -1.69
RFX1P22670 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX1P22670 AC135776.4-201ENST00000624300 1904 ntBASIC4.48□□□□□ -1.69
RFX1P22670 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.48□□□□□ -1.69
RFX1P22670 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFX1P22670 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.48□□□□□ -1.69
RFX1P22670 SNORA25.1-201ENST00000362326 128 ntBASIC4.48□□□□□ -1.69
RFX1P22670 RNU1-105P-201ENST00000363470 161 ntBASIC4.48□□□□□ -1.69
RFX1P22670 Y_RNA.150-201ENST00000363562 102 ntBASIC4.48□□□□□ -1.69
RFX1P22670 Y_RNA.331-201ENST00000365267 102 ntBASIC4.48□□□□□ -1.69
RFX1P22670 RNU6-1310P-201ENST00000384153 107 ntBASIC4.48□□□□□ -1.69
RFX1P22670 MIR549A-201ENST00000385268 96 ntBASIC4.48□□□□□ -1.69
RFX1P22670 Y_RNA.793-201ENST00000411222 111 ntBASIC4.48□□□□□ -1.69
RFX1P22670 AL356095.1-201ENST00000417217 199 ntBASIC4.48□□□□□ -1.69
RFX1P22670 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.48□□□□□ -1.69
RFX1P22670 GOT2P5-201ENST00000433995 546 ntBASIC4.48□□□□□ -1.69
RFX1P22670 SETP5-201ENST00000437270 562 ntBASIC4.48□□□□□ -1.69
RFX1P22670 HMGN2P20-201ENST00000437531 273 ntBASIC4.48□□□□□ -1.69
RFX1P22670 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.48□□□□□ -1.69
RFX1P22670 RN7SL271P-201ENST00000487601 295 ntBASIC4.48□□□□□ -1.69
RFX1P22670 EIF4A1P12-201ENST00000551910 141 ntBASIC4.48□□□□□ -1.69
RFX1P22670 AC018448.1-201ENST00000552843 316 ntBASIC4.48□□□□□ -1.69
RFX1P22670 AL606490.9-201ENST00000603331 271 ntBASIC4.48□□□□□ -1.69
RFX1P22670 AL162713.1-201ENST00000604480 262 ntBASIC4.48□□□□□ -1.69
RFX1P22670 AC006001.4-201ENST00000622243 395 ntBASIC4.48□□□□□ -1.69
RFX1P22670 CR392039.5-201ENST00000623201 510 ntBASIC4.48□□□□□ -1.69
RFX1P22670 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.48□□□□□ -1.69
RFX1P22670 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
RFX1P22670 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RFX1P22670 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFX1P22670 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFX1P22670 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX1P22670 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX1P22670 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.47□□□□□ -1.69
RFX1P22670 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX1P22670 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX1P22670 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RFX1P22670 AC007496.3-201ENST00000624987 3443 ntBASIC4.47□□□□□ -1.69
RFX1P22670 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX1P22670 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX1P22670 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX1P22670 UBE2WP1-201ENST00000362030 340 ntBASIC4.47□□□□□ -1.69
RFX1P22670 MIR410-201ENST00000362222 80 ntBASIC4.47□□□□□ -1.69
RFX1P22670 MIR208A-201ENST00000362287 71 ntBASIC4.47□□□□□ -1.69
RFX1P22670 Y_RNA.122-201ENST00000363331 96 ntBASIC4.47□□□□□ -1.69
RFX1P22670 RNU6-1210P-201ENST00000363775 107 ntBASIC4.47□□□□□ -1.69
RFX1P22670 RNA5SP130-201ENST00000364431 114 ntBASIC4.47□□□□□ -1.69
RFX1P22670 Y_RNA.270-201ENST00000364693 104 ntBASIC4.47□□□□□ -1.69
RFX1P22670 RNU6-378P-201ENST00000384324 107 ntBASIC4.47□□□□□ -1.69
RFX1P22670 RNU1-57P-201ENST00000384491 166 ntBASIC4.47□□□□□ -1.69
RFX1P22670 MIR186-201ENST00000384988 86 ntBASIC4.47□□□□□ -1.69
RFX1P22670 MTCO1P5-201ENST00000433573 344 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms