Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.39□□□□□ -2.19
USF1P22415 AC132942.1-201ENST00000486753 483 ntBASIC1.39□□□□□ -2.19
USF1P22415 AC005840.1-201ENST00000498412 377 ntBASIC1.39□□□□□ -2.19
USF1P22415 RNU6-377P-201ENST00000515965 102 ntBASIC1.39□□□□□ -2.19
USF1P22415 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
USF1P22415 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.39□□□□□ -2.19
USF1P22415 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.39□□□□□ -2.19
USF1P22415 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
USF1P22415 AC087441.2-201ENST00000529141 262 ntBASIC1.39□□□□□ -2.19
USF1P22415 AP005435.4-201ENST00000529514 284 ntBASIC1.39□□□□□ -2.19
USF1P22415 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.39□□□□□ -2.19
USF1P22415 AL356057.1-201ENST00000533798 831 ntBASIC1.39□□□□□ -2.19
USF1P22415 MIR3198-2-201ENST00000577868 80 ntBASIC1.39□□□□□ -2.19
USF1P22415 AC010900.2-201ENST00000604508 210 ntBASIC1.39□□□□□ -2.19
USF1P22415 AC008250.2-201ENST00000615261 205 ntBASIC1.39□□□□□ -2.19
USF1P22415 AC097372.5-201ENST00000623665 376 ntBASIC1.39□□□□□ -2.19
USF1P22415 AL603839.4-201ENST00000624658 1005 ntBASIC1.39□□□□□ -2.19
USF1P22415 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
USF1P22415 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
USF1P22415 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
USF1P22415 MIR126-201ENST00000362291 85 ntBASIC1.38□□□□□ -2.19
USF1P22415 RNU6-23P-201ENST00000363283 107 ntBASIC1.38□□□□□ -2.19
USF1P22415 SNORD48-201ENST00000364953 64 ntBASIC1.38□□□□□ -2.19
USF1P22415 MIR934-201ENST00000401241 83 ntBASIC1.38□□□□□ -2.19
USF1P22415 AC009961.2-201ENST00000435771 251 ntBASIC1.38□□□□□ -2.19
USF1P22415 AC079448.1-201ENST00000449377 373 ntBASIC1.38□□□□□ -2.19
USF1P22415 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.38□□□□□ -2.19
USF1P22415 MTND3P5-201ENST00000512798 333 ntBASIC1.38□□□□□ -2.19
USF1P22415 RNU6-415P-201ENST00000516252 97 ntBASIC1.38□□□□□ -2.19
USF1P22415 RNU6-232P-201ENST00000517144 64 ntBASIC1.38□□□□□ -2.19
USF1P22415 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.38□□□□□ -2.19
USF1P22415 ZNF321P-202ENST00000550843 495 ntBASIC1.38□□□□□ -2.19
USF1P22415 TRAV32-201ENST00000553993 340 ntBASIC1.38□□□□□ -2.19
USF1P22415 AC008015.1-201ENST00000555505 465 ntBASIC1.38□□□□□ -2.19
USF1P22415 AC104581.2-201ENST00000572227 430 ntBASIC1.38□□□□□ -2.19
USF1P22415 AL034555.1-201ENST00000604816 211 ntBASIC1.38□□□□□ -2.19
USF1P22415 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USF1P22415 AC122133.1-201ENST00000613964 233 ntBASIC1.38□□□□□ -2.19
USF1P22415 AC130454.1-201ENST00000622948 401 ntBASIC1.38□□□□□ -2.19
USF1P22415 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
USF1P22415 WWP1P1-201ENST00000466609 2769 ntBASIC1.38□□□□□ -2.19
USF1P22415 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USF1P22415 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USF1P22415 ZNF680P1-201ENST00000436625 1469 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-37P-201ENST00000362692 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-1097P-201ENST00000363586 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-553P-201ENST00000364047 96 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-11P-201ENST00000364234 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 SNORD32B-201ENST00000364460 84 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-715P-201ENST00000365204 103 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-108P-201ENST00000365558 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-25P-201ENST00000383873 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-1-201ENST00000383898 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-48P-201ENST00000384161 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-36P-201ENST00000384172 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-4P-201ENST00000384205 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-74P-201ENST00000384235 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-5P-201ENST00000384238 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-3P-201ENST00000384314 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-16P-201ENST00000384385 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-15P-201ENST00000384534 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-2-201ENST00000384627 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-29P-201ENST00000384637 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-9-201ENST00000384776 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-33P-201ENST00000384793 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 MIR454-201ENST00000390180 115 ntBASIC1.37□□□□□ -2.19
USF1P22415 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.37□□□□□ -2.19
USF1P22415 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.37□□□□□ -2.19
USF1P22415 AC243964.1-201ENST00000441814 261 ntBASIC1.37□□□□□ -2.19
USF1P22415 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
USF1P22415 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
USF1P22415 MTCYBP1-201ENST00000454315 1119 ntBASIC1.37□□□□□ -2.19
USF1P22415 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.37□□□□□ -2.19
USF1P22415 RNU7-182P-201ENST00000459009 62 ntBASIC1.37□□□□□ -2.19
USF1P22415 AC027575.1-201ENST00000481064 460 ntBASIC1.37□□□□□ -2.19
USF1P22415 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.37□□□□□ -2.19
USF1P22415 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.37□□□□□ -2.19
USF1P22415 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.37□□□□□ -2.19
USF1P22415 RNU6-1178P-201ENST00000516674 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 AC109479.2-201ENST00000517842 174 ntBASIC1.37□□□□□ -2.19
USF1P22415 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.37□□□□□ -2.19
USF1P22415 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.37□□□□□ -2.19
USF1P22415 MIR4775-201ENST00000581168 75 ntBASIC1.37□□□□□ -2.19
USF1P22415 MIR3136-201ENST00000583498 78 ntBASIC1.37□□□□□ -2.19
USF1P22415 AC008752.3-201ENST00000588113 712 ntBASIC1.37□□□□□ -2.19
USF1P22415 Z99289.3-201ENST00000605586 594 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU6-6P-201ENST00000606623 107 ntBASIC1.37□□□□□ -2.19
USF1P22415 AP001506.1-201ENST00000615444 211 ntBASIC1.37□□□□□ -2.19
USF1P22415 AF246928.1-201ENST00000623768 87 ntBASIC1.37□□□□□ -2.19
USF1P22415 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.37□□□□□ -2.19
USF1P22415 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.37□□□□□ -2.19
USF1P22415 RNU4-15P-201ENST00000362613 141 ntBASIC1.36□□□□□ -2.19
USF1P22415 RNA5SP493-201ENST00000364115 91 ntBASIC1.36□□□□□ -2.19
USF1P22415 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.36□□□□□ -2.19
USF1P22415 RNU6-142P-201ENST00000384019 107 ntBASIC1.36□□□□□ -2.19
USF1P22415 MIR30A-201ENST00000385092 71 ntBASIC1.36□□□□□ -2.19
USF1P22415 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
USF1P22415 RNA5SP100-201ENST00000410903 110 ntBASIC1.36□□□□□ -2.19
USF1P22415 RNA5SP59-201ENST00000410922 110 ntBASIC1.36□□□□□ -2.19
USF1P22415 HMGN1P14-201ENST00000412459 517 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms