Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.54□□□□□ -1.84
ATF4P18848 AK6P2-201ENST00000549020 471 ntBASIC3.54□□□□□ -1.84
ATF4P18848 RRN3P3-201ENST00000549207 578 ntBASIC3.54□□□□□ -1.84
ATF4P18848 AC018448.1-201ENST00000552843 316 ntBASIC3.54□□□□□ -1.84
ATF4P18848 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.54□□□□□ -1.84
ATF4P18848 MIR4284-201ENST00000578924 81 ntBASIC3.54□□□□□ -1.84
ATF4P18848 AC073657.2-201ENST00000605661 303 ntBASIC3.54□□□□□ -1.84
ATF4P18848 AC011373.1-201ENST00000607270 237 ntBASIC3.54□□□□□ -1.84
ATF4P18848 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.54□□□□□ -1.84
ATF4P18848 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.54□□□□□ -1.84
ATF4P18848 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.54□□□□□ -1.84
ATF4P18848 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATF4P18848 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.54□□□□□ -1.84
ATF4P18848 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATF4P18848 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATF4P18848 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATF4P18848 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.53□□□□□ -1.84
ATF4P18848 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATF4P18848 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATF4P18848 SNORD32B-201ENST00000364460 84 ntBASIC3.53□□□□□ -1.84
ATF4P18848 SNORA72.2-201ENST00000365028 127 ntBASIC3.53□□□□□ -1.84
ATF4P18848 Y_RNA.483-201ENST00000384380 101 ntBASIC3.53□□□□□ -1.84
ATF4P18848 RNU6-21P-201ENST00000384710 107 ntBASIC3.53□□□□□ -1.84
ATF4P18848 MT-TW-201ENST00000387382 68 ntBASIC3.53□□□□□ -1.84
ATF4P18848 SNORA48.8-201ENST00000391324 134 ntBASIC3.53□□□□□ -1.84
ATF4P18848 RNU2-25P-201ENST00000411041 191 ntBASIC3.53□□□□□ -1.84
ATF4P18848 CYCSP35-201ENST00000451978 304 ntBASIC3.53□□□□□ -1.84
ATF4P18848 RPS29P33-201ENST00000456717 146 ntBASIC3.53□□□□□ -1.84
ATF4P18848 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.53□□□□□ -1.84
ATF4P18848 UQCRHP4-201ENST00000471686 272 ntBASIC3.53□□□□□ -1.84
ATF4P18848 AC026784.1-201ENST00000507986 352 ntBASIC3.53□□□□□ -1.84
ATF4P18848 SEPT14P8-201ENST00000508026 178 ntBASIC3.53□□□□□ -1.84
ATF4P18848 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.53□□□□□ -1.84
ATF4P18848 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.53□□□□□ -1.84
ATF4P18848 AC108043.1-201ENST00000512696 574 ntBASIC3.53□□□□□ -1.84
ATF4P18848 RNU5F-4P-201ENST00000516581 114 ntBASIC3.53□□□□□ -1.84
ATF4P18848 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
ATF4P18848 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.53□□□□□ -1.84
ATF4P18848 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.53□□□□□ -1.84
ATF4P18848 AC005176.2-201ENST00000596933 147 ntBASIC3.53□□□□□ -1.84
ATF4P18848 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.53□□□□□ -1.84
ATF4P18848 AL713866.2-201ENST00000603579 219 ntBASIC3.53□□□□□ -1.84
ATF4P18848 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.53□□□□□ -1.84
ATF4P18848 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.53□□□□□ -1.84
ATF4P18848 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATF4P18848 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.53□□□□□ -1.84
ATF4P18848 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATF4P18848 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.53□□□□□ -1.84
ATF4P18848 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATF4P18848 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.53□□□□□ -1.84
ATF4P18848 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
ATF4P18848 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
ATF4P18848 Y_RNA.84-201ENST00000363011 104 ntBASIC3.52□□□□□ -1.85
ATF4P18848 RNA5SP240-201ENST00000365355 128 ntBASIC3.52□□□□□ -1.85
ATF4P18848 Y_RNA.476-201ENST00000384347 108 ntBASIC3.52□□□□□ -1.85
ATF4P18848 MIR141-201ENST00000384975 95 ntBASIC3.52□□□□□ -1.85
ATF4P18848 Y_RNA.602-201ENST00000410535 92 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AC016397.1-201ENST00000412463 242 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AL513477.1-202ENST00000417061 214 ntBASIC3.52□□□□□ -1.85
ATF4P18848 YME1L1P1-201ENST00000429435 297 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AC010326.1-201ENST00000462726 602 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AC083906.5-201ENST00000503722 328 ntBASIC3.52□□□□□ -1.85
ATF4P18848 RNU7-110P-201ENST00000516891 62 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.52□□□□□ -1.85
ATF4P18848 AP006245.1-201ENST00000522549 120 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.52□□□□□ -1.85
ATF4P18848 TGIF1P1-201ENST00000558095 802 ntBASIC3.52□□□□□ -1.85
ATF4P18848 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.52□□□□□ -1.85
ATF4P18848 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.52□□□□□ -1.85
ATF4P18848 AC120057.2-201ENST00000571520 271 ntBASIC3.52□□□□□ -1.85
ATF4P18848 MIR3616-201ENST00000584070 92 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.52□□□□□ -1.85
ATF4P18848 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
ATF4P18848 SNORD113-5-201ENST00000607261 78 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AL357075.2-201ENST00000614906 189 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AP000346.3-201ENST00000622821 210 ntBASIC3.52□□□□□ -1.85
ATF4P18848 AC010615.1-201ENST00000594254 1764 ntBASIC3.52□□□□□ -1.85
ATF4P18848 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ATF4P18848 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.52□□□□□ -1.85
ATF4P18848 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.52□□□□□ -1.85
ATF4P18848 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
ATF4P18848 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATF4P18848 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATF4P18848 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATF4P18848 RNU4-90P-201ENST00000362773 141 ntBASIC3.51□□□□□ -1.85
ATF4P18848 SNORD81.1-201ENST00000363064 77 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RNU6-961P-201ENST00000363893 105 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RNU1-63P-201ENST00000383902 164 ntBASIC3.51□□□□□ -1.85
ATF4P18848 Y_RNA.489-201ENST00000384410 101 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RNU6-1274P-201ENST00000384557 107 ntBASIC3.51□□□□□ -1.85
ATF4P18848 MIR184-201ENST00000384962 84 ntBASIC3.51□□□□□ -1.85
ATF4P18848 FO393413.1-201ENST00000402892 195 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RNA5SP475-201ENST00000410568 110 ntBASIC3.51□□□□□ -1.85
ATF4P18848 DNAJC19P7-201ENST00000428811 344 ntBASIC3.51□□□□□ -1.85
ATF4P18848 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.51□□□□□ -1.85
ATF4P18848 AC016831.4-201ENST00000438302 307 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RBMY2UP-201ENST00000453474 324 ntBASIC3.51□□□□□ -1.85
ATF4P18848 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
ATF4P18848 SNORD127-201ENST00000458892 86 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms