Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.57□□□□□ -1.84
PTPN1P18031 MIR4276-201ENST00000584832 70 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN1P18031 AL355877.2-201ENST00000603670 358 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 MIR6076-201ENST00000617521 113 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN1P18031 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
PTPN1P18031 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN1P18031 Z83843.1-201ENST00000604070 3685 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN1P18031 AC002546.1-201ENST00000588041 2504 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PTPN1P18031 AL353743.1-202ENST00000431724 1695 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AP002088.1-201ENST00000382740 395 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 RNU6-142P-201ENST00000384019 107 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 RNU6-121P-201ENST00000410525 99 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 RNU2-38P-201ENST00000410856 79 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AC005326.1-201ENST00000429197 123 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 ARF4P2-201ENST00000430209 526 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.56□□□□□ -1.84
PTPN1P18031 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN1P18031 RPL23AP67-201ENST00000465341 474 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 Y_RNA.713-201ENST00000517013 96 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 RNU6-570P-201ENST00000517051 105 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN1P18031 AC016256.1-201ENST00000547971 354 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AC006199.1-201ENST00000548728 219 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AC009163.5-201ENST00000575421 637 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AL162713.1-201ENST00000604480 262 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 MIR8058-201ENST00000615737 89 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 MIR3529-201ENST00000637713 78 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
PTPN1P18031 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN1P18031 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN1P18031 RNU6-222P-201ENST00000362438 107 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 Y_RNA.257-201ENST00000364596 102 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PTPN1P18031 Y_RNA.439-201ENST00000384119 94 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 SNORA29-201ENST00000384183 140 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 MIR544A-201ENST00000384855 91 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 MIR32-201ENST00000384965 70 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 MIR153-2-201ENST00000385225 87 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 RNA5SP120-201ENST00000410900 112 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 RN7SKP58-201ENST00000411010 305 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 AC126124.2-201ENST00000413542 321 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 RPL21P38-201ENST00000418090 167 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN1P18031 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN1P18031 RPL23AP83-201ENST00000434984 473 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 AC012308.1-201ENST00000451232 178 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 AC087477.1-201ENST00000465747 340 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 SNRPGP7-201ENST00000469016 106 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 RN7SL330P-201ENST00000469709 307 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 RPL30P14-201ENST00000482744 348 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 AC022868.1-201ENST00000517767 391 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 AC093023.1-201ENST00000547375 507 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN1P18031 HMGN2P15-201ENST00000585707 270 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 SNORA43.4-201ENST00000629559 138 ntBASIC3.55□□□□□ -1.84
PTPN1P18031 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN1P18031 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN1P18031 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN1P18031 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN1P18031 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN1P18031 AL353746.1-201ENST00000566293 6881 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PTPN1P18031 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN1P18031 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 Y_RNA.14-201ENST00000362415 103 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 SNORA9-201ENST00000384215 133 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 Y_RNA.504-201ENST00000384481 104 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 MT-TR-201ENST00000387439 65 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTPN1P18031 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 ARL5AP4-201ENST00000430731 512 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 snoU13.28-201ENST00000459235 104 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 TRBVB-201ENST00000477100 408 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN1P18031 Y_RNA.680-201ENST00000516441 93 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 AC107934.2-201ENST00000518653 310 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN1P18031 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN1P18031 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN1P18031 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN1P18031 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.54□□□□□ -1.84
PTPN1P18031 AC096772.1-201ENST00000609146 564 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 AL442067.1-201ENST00000613261 223 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 MIR3199-2-201ENST00000636243 86 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PTPN1P18031 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN1P18031 HAUS6P2-201ENST00000433254 2404 ntBASIC3.54□□□□□ -1.84
PTPN1P18031 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN1P18031 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms