Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC100821.1-201ENST00000523153 2479 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 SNORA24.1-201ENST00000384401 135 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 MTCYBP2-201ENST00000407745 171 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 RPS15AP12-201ENST00000419498 388 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.71□□□□□ -2.3
UBBP0CG47 AC000111.3-201ENST00000433478 193 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.71□□□□□ -2.3
UBBP0CG47 RPL9P9-202ENST00000466501 579 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC145146.1-201ENST00000496370 254 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 RNU6-685P-201ENST00000517088 95 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC019176.1-201ENST00000518519 225 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.71□□□□□ -2.3
UBBP0CG47 CYP3A52P-201ENST00000563326 91 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.71□□□□□ -2.3
UBBP0CG47 AP001004.1-201ENST00000582468 324 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC008521.1-201ENST00000587471 187 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.71□□□□□ -2.3
UBBP0CG47 VN1R80P-201ENST00000597126 338 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AL139286.2-201ENST00000606838 396 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC026585.1-201ENST00000619582 524 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC097372.5-201ENST00000623665 376 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 Z69720.2-201ENST00000624755 279 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC099654.5-201ENST00000636479 350 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 U4.7-201ENST00000638126 106 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 AC013437.2-201ENST00000639587 677 ntBASIC0.71□□□□□ -2.3
UBBP0CG47 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
UBBP0CG47 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.7□□□□□ -2.3
UBBP0CG47 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
UBBP0CG47 SNORD56.2-201ENST00000363242 71 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 RNU6-105P-201ENST00000363909 104 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 Y_RNA.255-201ENST00000364581 97 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 RNU6-61P-201ENST00000365528 109 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 RNU6-83P-201ENST00000384568 112 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 MIR520A-201ENST00000384862 85 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 MIR515-2-201ENST00000384883 83 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 MIR515-1-201ENST00000384884 83 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 RPL23AP32-201ENST00000395315 459 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 MRPL35P1-201ENST00000404272 572 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AL117342.1-201ENST00000404861 406 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 RNU6-607P-201ENST00000411283 108 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
UBBP0CG47 MTND1P20-201ENST00000430341 950 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.7□□□□□ -2.3
UBBP0CG47 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.7□□□□□ -2.3
UBBP0CG47 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.7□□□□□ -2.3
UBBP0CG47 SNRPFP4-201ENST00000456366 242 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AP000797.1-201ENST00000478870 387 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 HMGN1P13-201ENST00000505795 138 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 RBBP4P6-201ENST00000508098 202 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.7□□□□□ -2.3
UBBP0CG47 AC005741.1-201ENST00000511094 432 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.7□□□□□ -2.3
UBBP0CG47 ADI1P3-201ENST00000549509 470 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.7□□□□□ -2.3
UBBP0CG47 MIR3937-201ENST00000580135 106 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 MIR4661-201ENST00000582720 75 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AC012507.3-201ENST00000603556 477 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AC009033.1-201ENST00000624279 431 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AL157786.1-207ENST00000627771 695 ntBASIC0.7□□□□□ -2.3
UBBP0CG47 AL391994.1-201ENST00000254724 282 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AC073343.1-201ENST00000328239 651 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 RNU1-36P-201ENST00000365130 165 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.69□□□□□ -2.3
UBBP0CG47 RNU6-809P-201ENST00000384461 107 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 MIR544A-201ENST00000384855 91 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 MIR558-201ENST00000384920 94 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 MIR23A-201ENST00000385245 73 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 SNORA26.3-201ENST00000391119 136 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 MTCYBP36-201ENST00000404146 440 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.69□□□□□ -2.3
UBBP0CG47 AC243964.1-201ENST00000441814 261 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AL031313.1-201ENST00000448435 256 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AC007547.1-201ENST00000462177 490 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.69□□□□□ -2.3
UBBP0CG47 AC022447.4-201ENST00000504053 364 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.69□□□□□ -2.3
UBBP0CG47 MTND3P25-201ENST00000509243 135 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.69□□□□□ -2.3
UBBP0CG47 MTCO3P28-201ENST00000513351 515 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 SNORD60.2-201ENST00000516883 86 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AP000889.1-201ENST00000530968 660 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.69□□□□□ -2.3
UBBP0CG47 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.69□□□□□ -2.3
UBBP0CG47 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.69□□□□□ -2.3
UBBP0CG47 AL391646.1-201ENST00000603860 190 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 BNIP3P31-201ENST00000604515 566 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 CTHRC1P1-201ENST00000605383 469 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AC121334.2-201ENST00000605387 271 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AC211469.2-201ENST00000605461 205 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 MIR8065-201ENST00000620577 100 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 AC027335.2-201ENST00000624030 375 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 SNORD98-201ENST00000636377 67 ntBASIC0.69□□□□□ -2.3
UBBP0CG47 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
UBBP0CG47 AC010615.1-201ENST00000594254 1764 ntBASIC0.68□□□□□ -2.3
UBBP0CG47 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.68□□□□□ -2.3
UBBP0CG47 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBBP0CG47 RNU5E-7P-201ENST00000365290 117 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms