Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AL353752.1-201ENST00000454946 260 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.34□□□□□ -2.03
LINGO3P0C6S8 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 RNU5F-2P-201ENST00000516066 82 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
LINGO3P0C6S8 HSPE1P4-201ENST00000550617 308 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AP000907.4-201ENST00000604143 237 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AC104458.1-201ENST00000608243 463 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 AC122108.2-201ENST00000611946 526 ntBASIC2.34□□□□□ -2.03
LINGO3P0C6S8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LINGO3P0C6S8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
LINGO3P0C6S8 SNORD113-7-201ENST00000363762 77 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 U3.12-201ENST00000364498 214 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 Y_RNA.530-201ENST00000384587 101 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 MIR95-201ENST00000385072 81 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 RN7SKP158-201ENST00000410453 326 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AC244670.1-201ENST00000436879 112 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.33□□□□□ -2.04
LINGO3P0C6S8 IPO7P1-201ENST00000442031 636 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.33□□□□□ -2.04
LINGO3P0C6S8 MTCYBP18-201ENST00000501056 747 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AC092436.3-201ENST00000511788 257 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AP000889.2-201ENST00000532684 490 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AP001836.1-201ENST00000604675 523 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 FAM157A-202ENST00000615155 405 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AC007014.2-201ENST00000615581 479 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 U4atac.1-201ENST00000618345 95 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 AC100810.6-201ENST00000638068 285 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
LINGO3P0C6S8 MTND4P23-201ENST00000447723 1363 ntBASIC2.33□□□□□ -2.04
LINGO3P0C6S8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 Y_RNA.100-201ENST00000363141 102 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 SNORD32A-201ENST00000364805 84 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 RNU6-1274P-201ENST00000384557 107 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 MIR196B-201ENST00000384852 84 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 MIR561-201ENST00000385216 97 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AL591034.2-201ENST00000402839 359 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 RNA5SP338-201ENST00000410495 85 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 RPL9P9-202ENST00000466501 579 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 RNU6-612P-201ENST00000516909 102 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 SNORA48.11-201ENST00000517015 89 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AC026371.1-201ENST00000551867 419 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AC007375.1-201ENST00000554513 578 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AL356157.2-201ENST00000605122 111 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AC090617.10-201ENST00000624308 134 ntBASIC2.32□□□□□ -2.04
LINGO3P0C6S8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LINGO3P0C6S8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AL596028.1-201ENST00000326971 197 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 RNU1-23P-201ENST00000363361 144 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 RNU1-91P-201ENST00000364746 163 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 Y_RNA.510-201ENST00000384511 114 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 MIR29B2-201ENST00000385055 81 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 RNA5SP118-201ENST00000410385 109 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 Y_RNA.599-201ENST00000410489 109 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 VN1R36P-201ENST00000414936 291 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC009161.1-201ENST00000417306 376 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AL590556.1-201ENST00000423231 483 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 UBE2V1P4-201ENST00000425374 344 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC009238.1-201ENST00000442165 424 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC009237.6-201ENST00000446969 424 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AL139109.1-201ENST00000455491 297 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AMD1P1-201ENST00000457220 922 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC068781.1-201ENST00000488231 618 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 FAM206BP-201ENST00000510179 541 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 TRAV32-201ENST00000553993 340 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC100830.2-201ENST00000581636 240 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC084782.3-201ENST00000612282 578 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 AC063943.3-201ENST00000615562 356 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 SNORD98-201ENST00000636377 67 ntBASIC2.31□□□□□ -2.04
LINGO3P0C6S8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.31□□□□□ -2.04
LINGO3P0C6S8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.3□□□□□ -2.04
LINGO3P0C6S8 RNU6-1317P-201ENST00000364582 104 ntBASIC2.3□□□□□ -2.04
LINGO3P0C6S8 RNU6-128P-201ENST00000383976 107 ntBASIC2.3□□□□□ -2.04
LINGO3P0C6S8 Y_RNA.504-201ENST00000384481 104 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms