Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NIFKP6-201ENST00000598115 845 ntBASIC1.06□□□□□ -2.24
TPM1P09493 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.06□□□□□ -2.24
TPM1P09493 AC012676.2-201ENST00000619258 186 ntBASIC1.06□□□□□ -2.24
TPM1P09493 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.06□□□□□ -2.24
TPM1P09493 AC097372.5-201ENST00000623665 376 ntBASIC1.06□□□□□ -2.24
TPM1P09493 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
TPM1P09493 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.06□□□□□ -2.24
TPM1P09493 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.06□□□□□ -2.24
TPM1P09493 AL159152.1-201ENST00000635019 2587 ntBASIC1.05□□□□□ -2.24
TPM1P09493 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
TPM1P09493 RNU4-68P-201ENST00000364314 141 ntBASIC1.05□□□□□ -2.24
TPM1P09493 SNORA17.3-201ENST00000391159 129 ntBASIC1.05□□□□□ -2.24
TPM1P09493 MTCYBP2-201ENST00000407745 171 ntBASIC1.05□□□□□ -2.24
TPM1P09493 RNU6-757P-201ENST00000410334 100 ntBASIC1.05□□□□□ -2.24
TPM1P09493 MTCO1P21-201ENST00000416634 589 ntBASIC1.05□□□□□ -2.24
TPM1P09493 ARL5AP1-201ENST00000418991 388 ntBASIC1.05□□□□□ -2.24
TPM1P09493 RPL22P17-201ENST00000438729 315 ntBASIC1.05□□□□□ -2.24
TPM1P09493 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.05□□□□□ -2.24
TPM1P09493 AL049829.1-201ENST00000465411 156 ntBASIC1.05□□□□□ -2.24
TPM1P09493 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
TPM1P09493 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.05□□□□□ -2.24
TPM1P09493 RNA5SP337-201ENST00000517007 109 ntBASIC1.05□□□□□ -2.24
TPM1P09493 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.05□□□□□ -2.24
TPM1P09493 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.05□□□□□ -2.24
TPM1P09493 MIR5692A1-201ENST00000580523 69 ntBASIC1.05□□□□□ -2.24
TPM1P09493 AC110760.3-201ENST00000598794 467 ntBASIC1.05□□□□□ -2.24
TPM1P09493 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.05□□□□□ -2.24
TPM1P09493 MIR3976-201ENST00000606807 139 ntBASIC1.05□□□□□ -2.24
TPM1P09493 AL365434.2-201ENST00000607979 234 ntBASIC1.05□□□□□ -2.24
TPM1P09493 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.05□□□□□ -2.24
TPM1P09493 AP000484.1-201ENST00000620067 1252 ntBASIC1.05□□□□□ -2.24
TPM1P09493 U4.7-201ENST00000638126 106 ntBASIC1.05□□□□□ -2.24
TPM1P09493 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
TPM1P09493 RNA5SP213-201ENST00000391031 106 ntBASIC1.04□□□□□ -2.24
TPM1P09493 SNORA12.2-201ENST00000391040 156 ntBASIC1.04□□□□□ -2.24
TPM1P09493 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
TPM1P09493 MIR1261-201ENST00000408659 82 ntBASIC1.04□□□□□ -2.24
TPM1P09493 RNU6-1245P-201ENST00000411130 106 ntBASIC1.04□□□□□ -2.24
TPM1P09493 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.04□□□□□ -2.24
TPM1P09493 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM1P09493 AL591806.2-201ENST00000433122 173 ntBASIC1.04□□□□□ -2.24
TPM1P09493 AL121890.1-201ENST00000435457 205 ntBASIC1.04□□□□□ -2.24
TPM1P09493 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM1P09493 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM1P09493 snoU13.27-201ENST00000459278 104 ntBASIC1.04□□□□□ -2.24
TPM1P09493 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
TPM1P09493 RNU6-467P-201ENST00000517027 110 ntBASIC1.04□□□□□ -2.24
TPM1P09493 AC105185.1-201ENST00000518705 535 ntBASIC1.04□□□□□ -2.24
TPM1P09493 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM1P09493 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.04□□□□□ -2.24
TPM1P09493 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM1P09493 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.04□□□□□ -2.24
TPM1P09493 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM1P09493 AC087883.1-201ENST00000551882 391 ntBASIC1.04□□□□□ -2.24
TPM1P09493 AC008752.3-201ENST00000588113 712 ntBASIC1.04□□□□□ -2.24
TPM1P09493 BNIP3P8-201ENST00000597863 560 ntBASIC1.04□□□□□ -2.24
TPM1P09493 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
TPM1P09493 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
TPM1P09493 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
TPM1P09493 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
TPM1P09493 AL157786.1-207ENST00000627771 695 ntBASIC1.04□□□□□ -2.24
TPM1P09493 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.04□□□□□ -2.24
TPM1P09493 RNU6-105P-201ENST00000363909 104 ntBASIC1.03□□□□□ -2.24
TPM1P09493 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
TPM1P09493 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.03□□□□□ -2.24
TPM1P09493 MTCO3P29-201ENST00000432119 779 ntBASIC1.03□□□□□ -2.24
TPM1P09493 AC069257.2-201ENST00000441819 155 ntBASIC1.03□□□□□ -2.24
TPM1P09493 RPL31P3-201ENST00000458430 332 ntBASIC1.03□□□□□ -2.24
TPM1P09493 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.03□□□□□ -2.24
TPM1P09493 AC109446.1-201ENST00000566172 220 ntBASIC1.03□□□□□ -2.24
TPM1P09493 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.03□□□□□ -2.24
TPM1P09493 BNIP3P40-201ENST00000596017 556 ntBASIC1.03□□□□□ -2.24
TPM1P09493 Y_RNA.97-201ENST00000363094 102 ntBASIC1.02□□□□□ -2.25
TPM1P09493 RNU6-331P-201ENST00000384724 107 ntBASIC1.02□□□□□ -2.25
TPM1P09493 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
TPM1P09493 SNORA11.2-201ENST00000408318 127 ntBASIC1.02□□□□□ -2.25
TPM1P09493 AC137499.1-201ENST00000427602 88 ntBASIC1.02□□□□□ -2.25
TPM1P09493 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.02□□□□□ -2.25
TPM1P09493 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.02□□□□□ -2.25
TPM1P09493 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM1P09493 AC116347.2-201ENST00000514912 523 ntBASIC1.02□□□□□ -2.25
TPM1P09493 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.02□□□□□ -2.25
TPM1P09493 AC009977.1-201ENST00000586015 570 ntBASIC1.02□□□□□ -2.25
TPM1P09493 AC012507.3-201ENST00000603556 477 ntBASIC1.02□□□□□ -2.25
TPM1P09493 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM1P09493 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM1P09493 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM1P09493 AL138960.2-201ENST00000625145 535 ntBASIC1.02□□□□□ -2.25
TPM1P09493 RNU6-931P-201ENST00000363850 107 ntBASIC1.01□□□□□ -2.25
TPM1P09493 RNU1-96P-201ENST00000364163 162 ntBASIC1.01□□□□□ -2.25
TPM1P09493 SNORA24.1-201ENST00000384401 135 ntBASIC1.01□□□□□ -2.25
TPM1P09493 RNA5SP111-201ENST00000411386 101 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AC004965.1-201ENST00000413033 213 ntBASIC1.01□□□□□ -2.25
TPM1P09493 C1DP2-201ENST00000418167 426 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM1P09493 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.01□□□□□ -2.25
TPM1P09493 AC243964.1-201ENST00000441814 261 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM1P09493 TOMM22P6-201ENST00000465035 409 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AP001893.2-201ENST00000526949 202 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms