Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 MIR3973-201ENST00000579824 107 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 BNIP3P16-201ENST00000589779 534 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 AL034555.1-201ENST00000604816 211 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 AC083806.3-201ENST00000614016 455 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 AL158163.2-201ENST00000619110 700 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 AL133216.2-202ENST00000634512 349 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.46□□□□□ -2.34
CXCL1P09341 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.46□□□□□ -2.34
CXCL1P09341 AC245060.5-201ENST00000610778 3293 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CXCL1P09341 RNU4-79P-201ENST00000362764 141 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 RNU1-96P-201ENST00000364163 162 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 SNORA12-201ENST00000391162 147 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 AL117342.1-201ENST00000404861 406 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 COX6CP10-201ENST00000416832 224 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 SNORD124-201ENST00000459577 104 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.45□□□□□ -2.34
CXCL1P09341 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.45□□□□□ -2.34
CXCL1P09341 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.45□□□□□ -2.34
CXCL1P09341 ATP5EP1-201ENST00000510257 156 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 Y_RNA.689-201ENST00000516589 107 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 AC090142.3-201ENST00000519012 385 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
CXCL1P09341 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.45□□□□□ -2.34
CXCL1P09341 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.45□□□□□ -2.34
CXCL1P09341 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.45□□□□□ -2.34
CXCL1P09341 AC022432.1-201ENST00000595739 310 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.45□□□□□ -2.34
CXCL1P09341 MTATP6P2-201ENST00000603319 678 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 AL590095.2-201ENST00000604136 117 ntBASIC0.45□□□□□ -2.34
CXCL1P09341 RNU6-384P-201ENST00000364900 104 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 RNU6-438P-201ENST00000365561 103 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 SNORA18.2-201ENST00000383865 132 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 RNU6-142P-201ENST00000384019 107 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
CXCL1P09341 FGF7P8-201ENST00000402994 292 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 RNU6-1054P-201ENST00000411293 104 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.44□□□□□ -2.34
CXCL1P09341 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
CXCL1P09341 AC002429.1-201ENST00000437672 148 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AC244505.5-201ENST00000443639 207 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 ART2BP-201ENST00000453501 499 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.44□□□□□ -2.34
CXCL1P09341 AC079395.1-201ENST00000510981 262 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AP000889.1-201ENST00000530968 660 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AC087894.1-201ENST00000538359 518 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.44□□□□□ -2.34
CXCL1P09341 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.44□□□□□ -2.34
CXCL1P09341 MIR4709-201ENST00000577272 72 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AP001004.1-201ENST00000582468 324 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 MIR3136-201ENST00000583498 78 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AC005776.1-201ENST00000603164 290 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AC024060.1-201ENST00000607052 494 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 AL353149.1-201ENST00000610667 244 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 MIR6835-201ENST00000621552 64 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 MTND4P16-201ENST00000466108 1367 ntBASIC0.44□□□□□ -2.34
CXCL1P09341 RNA5SP259-201ENST00000365541 109 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CXCL1P09341 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
CXCL1P09341 SNORA12.2-201ENST00000391040 156 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 RNU6-482P-201ENST00000391068 107 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 MTCYBP2-201ENST00000407745 171 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.43□□□□□ -2.34
CXCL1P09341 USP9YP14-201ENST00000430663 563 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.43□□□□□ -2.34
CXCL1P09341 AC016925.1-201ENST00000458303 298 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.43□□□□□ -2.34
CXCL1P09341 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 AC108078.2-201ENST00000510750 236 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 MTND3P5-201ENST00000512798 333 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 MTCO3P28-201ENST00000513351 515 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 MTCO3P27-201ENST00000514397 196 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 AL590705.4-201ENST00000532209 134 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 AL121579.1-201ENST00000555129 305 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 MIR548AC-201ENST00000585049 88 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 AC105148.1-201ENST00000604961 409 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 BCRP9-201ENST00000605312 388 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 AC144521.1-201ENST00000607148 956 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CXCL1P09341 AC131159.1-201ENST00000621854 213 ntBASIC0.43□□□□□ -2.34
CXCL1P09341 AL391994.1-201ENST00000254724 282 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 MIR373-201ENST00000362273 69 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 SNORD114-27-201ENST00000363766 70 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 RNU6-534P-201ENST00000364877 106 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 SNORD31B-201ENST00000364977 69 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 RNU6-769P-201ENST00000384407 104 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 RNU6-910P-201ENST00000390844 107 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.42□□□□□ -2.34
CXCL1P09341 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.42□□□□□ -2.34
CXCL1P09341 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.42□□□□□ -2.34
CXCL1P09341 AC073910.1-201ENST00000445047 438 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.42□□□□□ -2.34
CXCL1P09341 AC007395.1-201ENST00000451333 677 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 AC021146.8-201ENST00000507455 733 ntBASIC0.42□□□□□ -2.34
CXCL1P09341 AC104806.1-201ENST00000508720 308 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms