Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 SNORD98-201ENST00000636377 67 ntBASIC2.19□□□□□ -2.06
VIMP08670 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
VIMP08670 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
VIMP08670 SNORA67.4-201ENST00000384688 142 ntBASIC2.18□□□□□ -2.06
VIMP08670 MIR514A2-201ENST00000385131 88 ntBASIC2.18□□□□□ -2.06
VIMP08670 MIR514A3-201ENST00000385132 88 ntBASIC2.18□□□□□ -2.06
VIMP08670 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VIMP08670 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.18□□□□□ -2.06
VIMP08670 AC018634.1-201ENST00000437554 401 ntBASIC2.18□□□□□ -2.06
VIMP08670 SEPT14P3-201ENST00000439401 183 ntBASIC2.18□□□□□ -2.06
VIMP08670 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.18□□□□□ -2.06
VIMP08670 AL732372.2-207ENST00000445840 183 ntBASIC2.18□□□□□ -2.06
VIMP08670 SEPT14P2-201ENST00000453405 183 ntBASIC2.18□□□□□ -2.06
VIMP08670 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.18□□□□□ -2.06
VIMP08670 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.18□□□□□ -2.06
VIMP08670 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.18□□□□□ -2.06
VIMP08670 RNU6-1208P-201ENST00000459588 107 ntBASIC2.18□□□□□ -2.06
VIMP08670 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.18□□□□□ -2.06
VIMP08670 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.18□□□□□ -2.06
VIMP08670 SEPT14P4-201ENST00000513445 186 ntBASIC2.18□□□□□ -2.06
VIMP08670 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.18□□□□□ -2.06
VIMP08670 RN7SKP132-201ENST00000516001 208 ntBASIC2.18□□□□□ -2.06
VIMP08670 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
VIMP08670 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.18□□□□□ -2.06
VIMP08670 RNU6-323P-201ENST00000521915 107 ntBASIC2.18□□□□□ -2.06
VIMP08670 FO082796.1-201ENST00000523795 183 ntBASIC2.18□□□□□ -2.06
VIMP08670 AP005597.4-201ENST00000526762 229 ntBASIC2.18□□□□□ -2.06
VIMP08670 AC022616.8-201ENST00000533569 253 ntBASIC2.18□□□□□ -2.06
VIMP08670 HSPE1P4-201ENST00000550617 308 ntBASIC2.18□□□□□ -2.06
VIMP08670 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
VIMP08670 AL162413.1-201ENST00000603198 110 ntBASIC2.18□□□□□ -2.06
VIMP08670 AC018889.1-201ENST00000605372 397 ntBASIC2.18□□□□□ -2.06
VIMP08670 AL357078.3-201ENST00000607528 618 ntBASIC2.18□□□□□ -2.06
VIMP08670 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.18□□□□□ -2.06
VIMP08670 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
VIMP08670 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.18□□□□□ -2.06
VIMP08670 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.18□□□□□ -2.06
VIMP08670 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
VIMP08670 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
VIMP08670 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VIMP08670 AL139413.1-201ENST00000421309 217 ntBASIC2.17□□□□□ -2.06
VIMP08670 AL590135.1-201ENST00000422215 156 ntBASIC2.17□□□□□ -2.06
VIMP08670 AL590556.1-201ENST00000423231 483 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC019205.3-201ENST00000424573 156 ntBASIC2.17□□□□□ -2.06
VIMP08670 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.17□□□□□ -2.06
VIMP08670 RPL23AP83-201ENST00000434984 473 ntBASIC2.17□□□□□ -2.06
VIMP08670 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.17□□□□□ -2.06
VIMP08670 MTCO2P3-201ENST00000442543 421 ntBASIC2.17□□□□□ -2.06
VIMP08670 RPL32P28-201ENST00000443577 397 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC016700.2-201ENST00000446011 156 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC015911.1-201ENST00000495111 156 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC022447.4-201ENST00000504053 364 ntBASIC2.17□□□□□ -2.06
VIMP08670 RPL39P5-202ENST00000512505 151 ntBASIC2.17□□□□□ -2.06
VIMP08670 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.17□□□□□ -2.06
VIMP08670 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
VIMP08670 SNORA31.16-201ENST00000516773 139 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC087854.1-201ENST00000519706 414 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC018630.3-201ENST00000542637 96 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.17□□□□□ -2.06
VIMP08670 AC025423.5-201ENST00000550230 219 ntBASIC2.17□□□□□ -2.06
VIMP08670 ANP32BP3-201ENST00000559213 706 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.17□□□□□ -2.06
VIMP08670 MIR5692C1-201ENST00000585309 91 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.17□□□□□ -2.06
VIMP08670 AC009314.1-201ENST00000603871 304 ntBASIC2.17□□□□□ -2.06
VIMP08670 AP001836.1-201ENST00000604675 523 ntBASIC2.17□□□□□ -2.06
VIMP08670 AL132822.1-201ENST00000617063 513 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
VIMP08670 CTSLP2-204ENST00000629029 392 ntBASIC2.17□□□□□ -2.06
VIMP08670 AC068137.3-201ENST00000639191 341 ntBASIC2.17□□□□□ -2.06
VIMP08670 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VIMP08670 AC009487.4-201ENST00000624969 3585 ntBASIC2.17□□□□□ -2.06
VIMP08670 AP000560.1-201ENST00000624150 1937 ntBASIC2.17□□□□□ -2.06
VIMP08670 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VIMP08670 RNU4-15P-201ENST00000362613 141 ntBASIC2.16□□□□□ -2.06
VIMP08670 Y_RNA.167-201ENST00000363735 109 ntBASIC2.16□□□□□ -2.06
VIMP08670 Y_RNA.231-201ENST00000364358 102 ntBASIC2.16□□□□□ -2.06
VIMP08670 RNU6-1106P-201ENST00000390845 107 ntBASIC2.16□□□□□ -2.06
VIMP08670 AL590002.1-201ENST00000406554 418 ntBASIC2.16□□□□□ -2.06
VIMP08670 AL030996.1-201ENST00000411430 235 ntBASIC2.16□□□□□ -2.06
VIMP08670 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VIMP08670 ARL5AP1-201ENST00000418991 388 ntBASIC2.16□□□□□ -2.06
VIMP08670 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.16□□□□□ -2.06
VIMP08670 IFNA20P-201ENST00000436840 528 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.16□□□□□ -2.06
VIMP08670 AL137159.1-201ENST00000452808 512 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC107032.1-201ENST00000485945 480 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.16□□□□□ -2.06
VIMP08670 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.16□□□□□ -2.06
VIMP08670 AC234781.5-201ENST00000508429 271 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC091874.1-201ENST00000511402 339 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.16□□□□□ -2.06
VIMP08670 SNORA19.2-201ENST00000516013 114 ntBASIC2.16□□□□□ -2.06
VIMP08670 SNORD60.2-201ENST00000516883 86 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.16□□□□□ -2.06
VIMP08670 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.16□□□□□ -2.06
VIMP08670 AC026271.5-201ENST00000577873 130 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.16□□□□□ -2.06
VIMP08670 RNU6-89P-201ENST00000606519 100 ntBASIC2.16□□□□□ -2.06
VIMP08670 AC004492.1-201ENST00000607036 742 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms