Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MIR4307-201ENST00000582802 84 ntBASIC0.69□□□□□ -2.3
CTSDP07339 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
CTSDP07339 AL158032.1-201ENST00000605401 106 ntBASIC0.69□□□□□ -2.3
CTSDP07339 AC092106.3-201ENST00000611308 722 ntBASIC0.69□□□□□ -2.3
CTSDP07339 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.69□□□□□ -2.3
CTSDP07339 MIR8065-201ENST00000620577 100 ntBASIC0.69□□□□□ -2.3
CTSDP07339 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
CTSDP07339 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
CTSDP07339 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
CTSDP07339 MIR340-201ENST00000362125 95 ntBASIC0.68□□□□□ -2.3
CTSDP07339 RNU4-15P-201ENST00000362613 141 ntBASIC0.68□□□□□ -2.3
CTSDP07339 RNU6-78P-201ENST00000362897 107 ntBASIC0.68□□□□□ -2.3
CTSDP07339 SNORA29-201ENST00000384183 140 ntBASIC0.68□□□□□ -2.3
CTSDP07339 MIR578-201ENST00000384828 96 ntBASIC0.68□□□□□ -2.3
CTSDP07339 SNORA12-201ENST00000391162 147 ntBASIC0.68□□□□□ -2.3
CTSDP07339 MTCO3P41-201ENST00000414801 328 ntBASIC0.68□□□□□ -2.3
CTSDP07339 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.68□□□□□ -2.3
CTSDP07339 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.68□□□□□ -2.3
CTSDP07339 MTND5P2-201ENST00000442927 1142 ntBASIC0.68□□□□□ -2.3
CTSDP07339 PGBD4P5-201ENST00000445958 426 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.68□□□□□ -2.3
CTSDP07339 AC079140.3-201ENST00000511111 550 ntBASIC0.68□□□□□ -2.3
CTSDP07339 RNU5A-4P-201ENST00000516588 111 ntBASIC0.68□□□□□ -2.3
CTSDP07339 RNU6-113P-201ENST00000516653 101 ntBASIC0.68□□□□□ -2.3
CTSDP07339 SNORA31.16-201ENST00000516773 139 ntBASIC0.68□□□□□ -2.3
CTSDP07339 RNU6-1003P-201ENST00000517099 105 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.68□□□□□ -2.3
CTSDP07339 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.68□□□□□ -2.3
CTSDP07339 MTND3P19-201ENST00000603825 345 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AC112187.2-201ENST00000604345 283 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AL034555.1-201ENST00000604816 211 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AC121334.2-201ENST00000605387 271 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AC012409.4-201ENST00000612923 249 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AC099654.5-201ENST00000636479 350 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AC010615.1-201ENST00000594254 1764 ntBASIC0.68□□□□□ -2.3
CTSDP07339 AC073343.1-201ENST00000328239 651 ntBASIC0.67□□□□□ -2.3
CTSDP07339 Y_RNA.4-201ENST00000362333 112 ntBASIC0.67□□□□□ -2.3
CTSDP07339 SNORA18.2-201ENST00000383865 132 ntBASIC0.67□□□□□ -2.3
CTSDP07339 MIR544A-201ENST00000384855 91 ntBASIC0.67□□□□□ -2.3
CTSDP07339 MIR222-201ENST00000384992 110 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.67□□□□□ -2.3
CTSDP07339 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.67□□□□□ -2.3
CTSDP07339 AL591043.1-201ENST00000432461 424 ntBASIC0.67□□□□□ -2.3
CTSDP07339 MTND1P32-201ENST00000433043 938 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AC245047.4-201ENST00000433189 144 ntBASIC0.67□□□□□ -2.3
CTSDP07339 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.67□□□□□ -2.3
CTSDP07339 MTND3P1-201ENST00000441336 220 ntBASIC0.67□□□□□ -2.3
CTSDP07339 ART2BP-201ENST00000453501 499 ntBASIC0.67□□□□□ -2.3
CTSDP07339 MTND1P12-201ENST00000455231 147 ntBASIC0.67□□□□□ -2.3
CTSDP07339 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.67□□□□□ -2.3
CTSDP07339 AC145146.1-201ENST00000496370 254 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AL163195.1-201ENST00000496941 348 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AC022447.4-201ENST00000504053 364 ntBASIC0.67□□□□□ -2.3
CTSDP07339 MTND2P31-201ENST00000512602 616 ntBASIC0.67□□□□□ -2.3
CTSDP07339 RN7SKP265-201ENST00000516448 223 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.67□□□□□ -2.3
CTSDP07339 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.67□□□□□ -2.3
CTSDP07339 AC107934.1-201ENST00000522215 217 ntBASIC0.67□□□□□ -2.3
CTSDP07339 VN1R107P-201ENST00000601784 209 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AL590229.1-201ENST00000603497 542 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AL020996.3-201ENST00000606617 222 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AP002360.4-201ENST00000606980 481 ntBASIC0.67□□□□□ -2.3
CTSDP07339 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.67□□□□□ -2.3
CTSDP07339 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AC131159.1-201ENST00000621854 213 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AL138955.1-201ENST00000622881 1040 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AP002782.1-201ENST00000623107 614 ntBASIC0.67□□□□□ -2.3
CTSDP07339 AC009033.1-201ENST00000624279 431 ntBASIC0.67□□□□□ -2.3
CTSDP07339 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.67□□□□□ -2.3
CTSDP07339 RNU6-1285P-201ENST00000363480 105 ntBASIC0.66□□□□□ -2.3
CTSDP07339 SNORA63D-201ENST00000364359 132 ntBASIC0.66□□□□□ -2.3
CTSDP07339 RNU5E-7P-201ENST00000365290 117 ntBASIC0.66□□□□□ -2.3
CTSDP07339 MIR515-2-201ENST00000384883 83 ntBASIC0.66□□□□□ -2.3
CTSDP07339 MIR515-1-201ENST00000384884 83 ntBASIC0.66□□□□□ -2.3
CTSDP07339 RPS20P2-201ENST00000402520 389 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AL031779.1-201ENST00000415663 330 ntBASIC0.66□□□□□ -2.3
CTSDP07339 RPL22P18-201ENST00000417197 377 ntBASIC0.66□□□□□ -2.3
CTSDP07339 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.66□□□□□ -2.3
CTSDP07339 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.66□□□□□ -2.3
CTSDP07339 AC132479.1-201ENST00000449160 144 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AC114982.1-201ENST00000469402 321 ntBASIC0.66□□□□□ -2.3
CTSDP07339 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.66□□□□□ -2.3
CTSDP07339 MTND3P5-201ENST00000512798 333 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.66□□□□□ -2.3
CTSDP07339 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.66□□□□□ -2.3
CTSDP07339 AL512310.8-201ENST00000550183 120 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AC008015.1-201ENST00000555505 465 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.66□□□□□ -2.3
CTSDP07339 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AP005136.1-201ENST00000579765 429 ntBASIC0.66□□□□□ -2.3
CTSDP07339 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
CTSDP07339 MZT1P2-201ENST00000604387 248 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AC080013.3-201ENST00000606839 578 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AC106858.1-201ENST00000637497 429 ntBASIC0.66□□□□□ -2.3
CTSDP07339 AC103706.2-201ENST00000638080 240 ntBASIC0.66□□□□□ -2.3
CTSDP07339 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CTSDP07339 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
CTSDP07339 MIR96-201ENST00000362288 78 ntBASIC0.65□□□□□ -2.31
CTSDP07339 RNU1-124P-201ENST00000363861 145 ntBASIC0.65□□□□□ -2.31
CTSDP07339 RNU6-1019P-201ENST00000364424 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms