Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ELL2P3-201ENST00000457883 1602 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 RNU6-1120P-201ENST00000362988 108 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RNU6-1285P-201ENST00000363480 105 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RNU6-743P-201ENST00000364151 106 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RNU6-266P-201ENST00000364225 107 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RNU6-434P-201ENST00000384376 107 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 Y_RNA.553-201ENST00000384670 102 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 Y_RNA.597-201ENST00000410463 100 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RNU6-293P-201ENST00000411259 106 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL353193.1-201ENST00000421444 268 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 MTCYBP8-201ENST00000422855 651 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 MTATP6P17-201ENST00000431030 672 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL121890.1-201ENST00000435457 205 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RPL7P54-201ENST00000438336 674 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RNA5SP233-201ENST00000459153 113 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC079382.1-201ENST00000493346 557 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC010486.3-201ENST00000511602 785 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 LRRC34P2-201ENST00000514850 553 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 RNU6-377P-201ENST00000515965 102 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC022880.1-201ENST00000534017 973 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DPB1P04440 MTCO3P23-201ENST00000561363 289 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC026271.5-201ENST00000577873 130 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC011494.1-201ENST00000596454 237 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL158827.2-201ENST00000602494 330 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL359314.1-201ENST00000616913 261 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 MIR1248-201ENST00000629190 106 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL691447.3-201ENST00000635020 330 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AC241585.2-209ENST00000638217 143 ntBASIC1.5□□□□□ -2.17
HLA-DPB1P04440 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 Y_RNA.359-201ENST00000365498 102 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 RNU6-1222P-201ENST00000384615 107 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 RNU2-29P-201ENST00000410423 189 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AL117339.3-201ENST00000418733 162 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 BX510359.4-201ENST00000423750 193 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 MTCO2P19-201ENST00000427513 598 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC013470.1-201ENST00000453438 462 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 RPL23AP3-201ENST00000453844 468 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AL356010.1-201ENST00000456364 102 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 TPT1P7-201ENST00000458300 517 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 SNRPGP7-201ENST00000469016 106 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC087884.1-201ENST00000469738 328 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 HMGB3P17-201ENST00000504195 649 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC117532.1-201ENST00000514638 323 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AP001893.2-201ENST00000526949 202 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AL356057.1-201ENST00000533798 831 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC018630.3-201ENST00000542637 96 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC010928.2-201ENST00000588017 287 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 RSL24D1P11-201ENST00000591045 491 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC078899.2-201ENST00000595282 212 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC107304.1-201ENST00000604229 296 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC116312.1-201ENST00000606841 314 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 uc_338.11-201ENST00000619132 160 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 AC009509.4-201ENST00000619202 509 ntBASIC1.49□□□□□ -2.17
HLA-DPB1P04440 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 RNU6-611P-201ENST00000384276 104 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 RNU6-43P-201ENST00000384302 107 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 MIR29B2-201ENST00000385055 81 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 SNORA12-201ENST00000391162 147 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 POLHP1-201ENST00000411806 470 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 MTCO2P16-201ENST00000436962 677 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 RNU7-180P-201ENST00000459240 63 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 GMFBP1-201ENST00000467831 427 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC010424.1-201ENST00000506336 297 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 MTND2P33-201ENST00000506452 1031 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 CCDC34P1-201ENST00000507441 517 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC105417.1-201ENST00000514691 285 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 HIF1AP1-201ENST00000553642 175 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC103996.1-201ENST00000555468 102 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC006362.1-201ENST00000567392 174 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 DEFB122-202ENST00000569013 197 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 MIR4287-201ENST00000579398 78 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AL109918.3-201ENST00000603072 338 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AL096840.1-201ENST00000603287 93 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AL627230.6-201ENST00000611129 280 ntBASIC1.48□□□□□ -2.17
HLA-DPB1P04440 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms