Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 SNORD14B-201ENST00000364533 90 ntBASIC1.89□□□□□ -2.11
MMP1P03956 RNU6-116P-201ENST00000384042 109 ntBASIC1.89□□□□□ -2.11
MMP1P03956 RNU6-843P-201ENST00000384454 104 ntBASIC1.89□□□□□ -2.11
MMP1P03956 RNU6-1158P-201ENST00000391167 107 ntBASIC1.89□□□□□ -2.11
MMP1P03956 RNU4-55P-201ENST00000410731 137 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.89□□□□□ -2.11
MMP1P03956 EDDM3CP-201ENST00000415977 425 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AL669831.1-202ENST00000428504 417 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AL596276.1-201ENST00000434465 418 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC002486.1-201ENST00000435098 391 ntBASIC1.89□□□□□ -2.11
MMP1P03956 GTF2IP13-201ENST00000438487 386 ntBASIC1.89□□□□□ -2.11
MMP1P03956 GPM6BP3-201ENST00000442797 145 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
MMP1P03956 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.89□□□□□ -2.11
MMP1P03956 AL356010.1-201ENST00000456364 102 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.89□□□□□ -2.11
MMP1P03956 AC022364.2-201ENST00000457963 554 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC006512.1-201ENST00000468816 291 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.89□□□□□ -2.11
MMP1P03956 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.89□□□□□ -2.11
MMP1P03956 AC022880.1-201ENST00000534017 973 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.89□□□□□ -2.11
MMP1P03956 MIR3126-201ENST00000577443 74 ntBASIC1.89□□□□□ -2.11
MMP1P03956 MTATP6P3-201ENST00000581686 676 ntBASIC1.89□□□□□ -2.11
MMP1P03956 MIR548AC-201ENST00000585049 88 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC017083.3-201ENST00000609955 700 ntBASIC1.89□□□□□ -2.11
MMP1P03956 AC005609.4-201ENST00000625071 447 ntBASIC1.89□□□□□ -2.11
MMP1P03956 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MMP1P03956 HAUS6P2-201ENST00000433254 2404 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RNU6-1010P-201ENST00000362757 107 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RNU6-623P-201ENST00000363143 105 ntBASIC1.88□□□□□ -2.11
MMP1P03956 Y_RNA.796-201ENST00000364268 102 ntBASIC1.88□□□□□ -2.11
MMP1P03956 Y_RNA.799-201ENST00000364992 102 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RNU6-487P-201ENST00000365430 104 ntBASIC1.88□□□□□ -2.11
MMP1P03956 Y_RNA.409-201ENST00000383990 98 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RNU6-72P-201ENST00000384285 79 ntBASIC1.88□□□□□ -2.11
MMP1P03956 Y_RNA.517-201ENST00000384551 106 ntBASIC1.88□□□□□ -2.11
MMP1P03956 CALM2P3-201ENST00000400429 449 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RNA5SP111-201ENST00000411386 101 ntBASIC1.88□□□□□ -2.11
MMP1P03956 MTCO3P41-201ENST00000414801 328 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RPL21P90-201ENST00000415692 466 ntBASIC1.88□□□□□ -2.11
MMP1P03956 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP1P03956 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP1P03956 PSPHP1-201ENST00000450062 261 ntBASIC1.88□□□□□ -2.11
MMP1P03956 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP1P03956 AC079382.1-201ENST00000493346 557 ntBASIC1.88□□□□□ -2.11
MMP1P03956 RNA5SP503-201ENST00000517047 117 ntBASIC1.88□□□□□ -2.11
MMP1P03956 AC109329.1-201ENST00000518744 317 ntBASIC1.88□□□□□ -2.11
MMP1P03956 AP004607.1-201ENST00000524456 203 ntBASIC1.88□□□□□ -2.11
MMP1P03956 CR383656.8-201ENST00000549046 145 ntBASIC1.88□□□□□ -2.11
MMP1P03956 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP1P03956 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP1P03956 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP1P03956 BNIP3P30-201ENST00000601184 574 ntBASIC1.88□□□□□ -2.11
MMP1P03956 AC008121.3-201ENST00000618726 433 ntBASIC1.88□□□□□ -2.11
MMP1P03956 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.88□□□□□ -2.11
MMP1P03956 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.88□□□□□ -2.11
MMP1P03956 OR5AK4P-201ENST00000635912 903 ntBASIC1.88□□□□□ -2.11
MMP1P03956 U6.114-201ENST00000636407 96 ntBASIC1.88□□□□□ -2.11
MMP1P03956 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.88□□□□□ -2.11
MMP1P03956 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MMP1P03956 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MMP1P03956 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MMP1P03956 RNU6-1287P-201ENST00000362914 107 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU6-715P-201ENST00000365204 103 ntBASIC1.87□□□□□ -2.11
MMP1P03956 Y_RNA.355-201ENST00000365462 98 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU6-1042P-201ENST00000384204 107 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU1-57P-201ENST00000384491 166 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU6-1060P-201ENST00000384664 107 ntBASIC1.87□□□□□ -2.11
MMP1P03956 MIR561-201ENST00000385216 97 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU6-903P-201ENST00000391270 109 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU2-3P-201ENST00000410144 191 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RN7SKP101-201ENST00000411376 320 ntBASIC1.87□□□□□ -2.11
MMP1P03956 MTCYBP8-201ENST00000422855 651 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC008267.5-201ENST00000424928 265 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AIMP1P2-201ENST00000425294 312 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC073415.1-201ENST00000449240 153 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU7-95P-201ENST00000459222 64 ntBASIC1.87□□□□□ -2.11
MMP1P03956 HMGB1P30-201ENST00000492455 606 ntBASIC1.87□□□□□ -2.11
MMP1P03956 MTND3P25-201ENST00000509243 135 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.87□□□□□ -2.11
MMP1P03956 RNA5SP137-201ENST00000516833 135 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RNU2-19P-201ENST00000517288 84 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.87□□□□□ -2.11
MMP1P03956 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.87□□□□□ -2.11
MMP1P03956 MIR5583-1-201ENST00000580941 59 ntBASIC1.87□□□□□ -2.11
MMP1P03956 RPL30P11-203ENST00000598995 310 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC073410.2-201ENST00000603240 332 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC021646.1-201ENST00000605469 484 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AP001330.5-201ENST00000607176 411 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC092954.2-201ENST00000609103 430 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC093788.1-201ENST00000609356 927 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AL512598.1-201ENST00000610158 273 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC068944.2-201ENST00000610373 403 ntBASIC1.87□□□□□ -2.11
MMP1P03956 U6.42-201ENST00000618440 107 ntBASIC1.87□□□□□ -2.11
MMP1P03956 AC124864.2-201ENST00000624736 186 ntBASIC1.87□□□□□ -2.11
MMP1P03956 MIR6863-201ENST00000636112 90 ntBASIC1.87□□□□□ -2.11
MMP1P03956 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms