Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU6-295P-201ENST00000516901 104 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MT-ND4P03905 AC023050.3-201ENST00000541142 333 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.33□□□□□ -2.2
MT-ND4P03905 AC245014.2-201ENST00000603689 287 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 AC246785.4-201ENST00000605374 287 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 AL603755.1-201ENST00000619504 163 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 AC091304.6-201ENST00000619761 202 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.33□□□□□ -2.2
MT-ND4P03905 AC006026.1-201ENST00000444025 1803 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.32□□□□□ -2.2
MT-ND4P03905 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 RNU6-336P-201ENST00000364891 107 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 RNU4-48P-201ENST00000365559 182 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 RNU6-456P-201ENST00000384493 107 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AC068050.1-201ENST00000394891 380 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AL627390.1-201ENST00000396055 340 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
MT-ND4P03905 RNU4-46P-201ENST00000410818 138 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.32□□□□□ -2.2
MT-ND4P03905 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.32□□□□□ -2.2
MT-ND4P03905 HMGN2P23-201ENST00000456759 269 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 RNA5SP269-201ENST00000459032 137 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 SNRPGP7-201ENST00000469016 106 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.32□□□□□ -2.2
MT-ND4P03905 MTND3P5-201ENST00000512798 333 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.32□□□□□ -2.2
MT-ND4P03905 SNORA25.15-201ENST00000516487 89 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AC115990.1-201ENST00000526957 301 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 MIR4703-201ENST00000577728 79 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AC103987.3-201ENST00000582071 292 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.32□□□□□ -2.2
MT-ND4P03905 AC008752.3-201ENST00000588113 712 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.32□□□□□ -2.2
MT-ND4P03905 AC011494.1-201ENST00000596454 237 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AL034555.1-201ENST00000604816 211 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 Z99289.3-201ENST00000605586 594 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 AC091931.1-201ENST00000623488 728 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 MTND4P23-201ENST00000447723 1363 ntBASIC1.32□□□□□ -2.2
MT-ND4P03905 WWP1P1-201ENST00000466609 2769 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AP000648.3-201ENST00000623539 4507 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MT-ND4P03905 RNU6-181P-201ENST00000363225 107 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 Y_RNA.169-201ENST00000363745 96 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 RNU1-42P-201ENST00000364033 160 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 SNORD32B-201ENST00000364460 84 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MT-ND4P03905 RNU6-43P-201ENST00000384302 107 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 RNU6-393P-201ENST00000384475 107 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 MIR504-201ENST00000385065 83 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 SNORD70.1-201ENST00000391007 85 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 SNORA26.9-201ENST00000391322 122 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 RN7SKP51-201ENST00000410781 304 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 RNU6-1245P-201ENST00000411130 106 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AC009310.1-201ENST00000414414 451 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 MTCO2P34-201ENST00000421994 607 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AC133104.1-201ENST00000429100 218 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AC145146.1-201ENST00000496370 254 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.31□□□□□ -2.2
MT-ND4P03905 RNU6-445P-201ENST00000516949 107 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 SNORA44.1-201ENST00000517031 108 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.31□□□□□ -2.2
MT-ND4P03905 LRRC34P1-201ENST00000542742 915 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 TRAV32-201ENST00000553993 340 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 CYP2C61P-201ENST00000604072 290 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AC025754.2-201ENST00000606491 432 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
MT-ND4P03905 AC013412.1-201ENST00000610687 192 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MT-ND4P03905 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 U1.36-201ENST00000620684 176 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AC022418.1-201ENST00000624118 445 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 SNORD98-201ENST00000636377 67 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 AC241585.2-209ENST00000638217 143 ntBASIC1.31□□□□□ -2.2
MT-ND4P03905 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MT-ND4P03905 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
MT-ND4P03905 MIR424-201ENST00000362227 98 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 U3.4-201ENST00000363352 213 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 Y_RNA.201-201ENST00000364052 96 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 RNA5SP493-201ENST00000364115 91 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 SNORD114-6-201ENST00000364393 72 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 RNU6-1127P-201ENST00000384580 107 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 SNORA16.2-201ENST00000390991 127 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 AC010975.2-201ENST00000427781 588 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 VN1R108P-201ENST00000431580 830 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.3□□□□□ -2.2
MT-ND4P03905 AL031667.1-201ENST00000440222 725 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 PRPS1P1-201ENST00000445305 876 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 AC007677.1-201ENST00000445757 515 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 MTND1P18-201ENST00000448191 573 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 AC013470.1-201ENST00000453438 462 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 AC114801.2-201ENST00000503825 781 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 AC022447.4-201ENST00000504053 364 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 RNU2-69P-201ENST00000516061 100 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 RNVU1-2-201ENST00000516326 135 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
MT-ND4P03905 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms