Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC103996.1-201ENST00000555468 102 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.13□□□□□ -2.07
MT-ND1P03886 AC105137.2-201ENST00000569073 466 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AP001094.1-201ENST00000579805 193 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AL121917.1-203ENST00000605534 577 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AC097372.5-201ENST00000623665 376 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AC099654.14-201ENST00000638599 341 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
MT-ND1P03886 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
MT-ND1P03886 RBBP8P1-201ENST00000449447 1844 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 Y_RNA.160-201ENST00000363677 92 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 RNU1-91P-201ENST00000364746 163 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 RNU6-827P-201ENST00000365553 106 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 Y_RNA.414-201ENST00000384011 101 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 RNU6-843P-201ENST00000384454 104 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 RNA5SP270-201ENST00000411361 118 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 Z92545.1-201ENST00000411782 234 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.12□□□□□ -2.07
MT-ND1P03886 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.12□□□□□ -2.07
MT-ND1P03886 AC138393.2-201ENST00000414742 246 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 VN1R36P-201ENST00000414936 291 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC074117.2-201ENST00000417130 397 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 TOMM20P4-201ENST00000427861 435 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.12□□□□□ -2.07
MT-ND1P03886 MED28P2-201ENST00000475771 317 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 PRDX4P1-201ENST00000507189 574 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.12□□□□□ -2.07
MT-ND1P03886 AC010486.1-201ENST00000511793 424 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 RNU4-49P-201ENST00000516080 140 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 RNA5SP24-201ENST00000516478 95 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 RNU6-1088P-201ENST00000516850 104 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC069113.1-201ENST00000517763 267 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.12□□□□□ -2.07
MT-ND1P03886 AC087854.1-201ENST00000519706 414 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC021269.2-201ENST00000532318 330 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 SCOCP1-201ENST00000554676 349 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.12□□□□□ -2.07
MT-ND1P03886 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.12□□□□□ -2.07
MT-ND1P03886 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.12□□□□□ -2.07
MT-ND1P03886 AC006023.1-201ENST00000603944 259 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 ELOCP5-201ENST00000604924 333 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC009248.2-201ENST00000619826 254 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AC005858.4-201ENST00000623191 700 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AL133216.2-202ENST00000634512 349 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
MT-ND1P03886 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
MT-ND1P03886 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.12□□□□□ -2.07
MT-ND1P03886 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND1P03886 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND1P03886 SNORD56.1-201ENST00000362913 68 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 Y_RNA.100-201ENST00000363141 102 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 SNORD113-7-201ENST00000363762 77 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 SNORA5B-201ENST00000363786 132 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU6-105P-201ENST00000363909 104 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 Y_RNA.279-201ENST00000364763 95 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU6-336P-201ENST00000364891 107 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 Y_RNA.301-201ENST00000364990 103 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU6-1329P-201ENST00000365664 107 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU6-622P-201ENST00000384272 103 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNY3P14-201ENST00000384309 102 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND1P03886 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AC018634.1-201ENST00000437554 401 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND1P03886 AL161788.1-201ENST00000441805 169 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RPL32P28-201ENST00000443577 397 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AL031274.1-201ENST00000450334 232 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AC012308.1-201ENST00000451232 178 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AC140059.1-201ENST00000489238 361 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AC008628.2-201ENST00000502605 298 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AC079140.5-201ENST00000507882 310 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AC234781.5-201ENST00000508429 271 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RPL39P5-202ENST00000512505 151 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU6-377P-201ENST00000515965 102 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU6-864P-201ENST00000516256 108 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 RNU6-256P-201ENST00000516747 97 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 SNORA20.3-201ENST00000516880 132 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 IGLV3-17-201ENST00000519099 244 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AC104576.1-201ENST00000524225 88 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 COPS8P3-201ENST00000526024 482 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 CYCSP26-201ENST00000534107 320 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AL138726.1-201ENST00000614873 333 ntBASIC2.11□□□□□ -2.07
MT-ND1P03886 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND1P03886 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
MT-ND1P03886 RNU1-72P-201ENST00000362976 153 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 Y_RNA.88-201ENST00000363029 99 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 SNORD114-19-201ENST00000363072 75 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms