Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC092325.1-201ENST00000566449 554 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC008521.1-201ENST00000587471 187 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC012065.4-201ENST00000602445 679 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC009233.1-201ENST00000616477 371 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AL109933.3-201ENST00000619095 188 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC011155.2-201ENST00000623202 216 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC091931.1-201ENST00000623488 728 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC079248.2-201ENST00000623779 326 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.99□□□□□ -2.25
COL4A1P02462 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.99□□□□□ -2.25
COL4A1P02462 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 RNU6-529P-201ENST00000363383 104 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
COL4A1P02462 AL049545.1-201ENST00000401856 572 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AL133475.1-201ENST00000404414 305 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 BTF3L4P1-201ENST00000413813 468 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.98□□□□□ -2.25
COL4A1P02462 ELOCP4-201ENST00000420090 333 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 MTCYBP5-201ENST00000423752 1135 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A1P02462 AL445567.1-201ENST00000439121 144 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 MTND6P13-201ENST00000443510 523 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 NDUFB1P2-201ENST00000449477 176 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A1P02462 AC092001.1-201ENST00000453012 261 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A1P02462 RNA5SP112-201ENST00000515937 99 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AC022616.6-201ENST00000520479 119 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AC006199.1-201ENST00000548728 219 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A1P02462 AL133241.1-201ENST00000556832 487 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.98□□□□□ -2.25
COL4A1P02462 AC137800.2-201ENST00000574375 120 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AC093424.1-201ENST00000604999 338 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AC138749.5-201ENST00000611461 208 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.98□□□□□ -2.25
COL4A1P02462 AC116165.2-201ENST00000616705 206 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 AC091304.6-201ENST00000619761 202 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.98□□□□□ -2.25
COL4A1P02462 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COL4A1P02462 AC007792.1-201ENST00000623023 402 ntBASIC0.98□□□□□ -2.25
COL4A1P02462 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COL4A1P02462 RNU5F-7P-201ENST00000363696 115 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 SNORD116-20-201ENST00000384529 92 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RNA5SP390-201ENST00000410191 113 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.97□□□□□ -2.25
COL4A1P02462 MTND3P17-201ENST00000416968 344 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 PIGFP2-201ENST00000421400 651 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.97□□□□□ -2.25
COL4A1P02462 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 AL022238.1-201ENST00000442557 355 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.97□□□□□ -2.25
COL4A1P02462 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 MTCO2P29-201ENST00000465212 189 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC010486.2-201ENST00000505572 483 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RBBP4P6-201ENST00000508098 202 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COL4A1P02462 AC096745.1-201ENST00000509945 370 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 Y_RNA.672-201ENST00000516289 104 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RN7SKP287-201ENST00000516546 266 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RNU6-759P-201ENST00000516740 103 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RNU6-677P-201ENST00000516914 101 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
COL4A1P02462 OR5AL2P-201ENST00000532185 920 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.97□□□□□ -2.25
COL4A1P02462 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.97□□□□□ -2.25
COL4A1P02462 MTND1P24-201ENST00000552175 861 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.97□□□□□ -2.25
COL4A1P02462 MIR5692A1-201ENST00000580523 69 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 DEFB131E-202ENST00000602581 683 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL359999.1-201ENST00000604513 294 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL158032.1-201ENST00000605401 106 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 MIR412-201ENST00000362142 91 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RNA5SP499-201ENST00000363982 119 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RNU6-533P-201ENST00000384144 107 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
COL4A1P02462 RNU2-3P-201ENST00000410144 191 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC016831.2-201ENST00000417179 352 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC138623.1-201ENST00000418060 216 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 USP9YP18-201ENST00000425912 695 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 AC119618.1-201ENST00000434191 222 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COL4A1P02462 AC117503.1-201ENST00000472241 394 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 MTND3P25-201ENST00000509243 135 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 AP005639.2-201ENST00000527592 928 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.97□□□□□ -2.25
COL4A1P02462 AC009094.1-201ENST00000564443 426 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC025678.1-201ENST00000567861 338 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL713866.2-201ENST00000603579 219 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms