Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU2-25P-201ENST00000411041 191 ntBASIC2.69□□□□□ -1.98
LDLRP01130 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.69□□□□□ -1.98
LDLRP01130 AC009414.1-201ENST00000427200 443 ntBASIC2.69□□□□□ -1.98
LDLRP01130 TOMM20P4-201ENST00000427861 435 ntBASIC2.69□□□□□ -1.98
LDLRP01130 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.69□□□□□ -1.98
LDLRP01130 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.69□□□□□ -1.98
LDLRP01130 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.69□□□□□ -1.98
LDLRP01130 AC010095.1-201ENST00000443543 144 ntBASIC2.69□□□□□ -1.98
LDLRP01130 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.69□□□□□ -1.98
LDLRP01130 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.69□□□□□ -1.98
LDLRP01130 HMGN2P10-201ENST00000448085 265 ntBASIC2.69□□□□□ -1.98
LDLRP01130 RNU7-167P-201ENST00000459160 62 ntBASIC2.69□□□□□ -1.98
LDLRP01130 AC011005.2-201ENST00000487324 359 ntBASIC2.69□□□□□ -1.98
LDLRP01130 RPS27P27-201ENST00000498779 255 ntBASIC2.69□□□□□ -1.98
LDLRP01130 AIG1P1-201ENST00000503376 148 ntBASIC2.69□□□□□ -1.98
LDLRP01130 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.69□□□□□ -1.98
LDLRP01130 RNU1-41P-201ENST00000516161 162 ntBASIC2.69□□□□□ -1.98
LDLRP01130 RNU1-48P-201ENST00000516400 162 ntBASIC2.69□□□□□ -1.98
LDLRP01130 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.69□□□□□ -1.98
LDLRP01130 LRRC37A5P-203ENST00000580181 585 ntBASIC2.69□□□□□ -1.98
LDLRP01130 MIR3605-201ENST00000583214 100 ntBASIC2.69□□□□□ -1.98
LDLRP01130 AL355877.2-201ENST00000603670 358 ntBASIC2.69□□□□□ -1.98
LDLRP01130 AL132822.1-201ENST00000617063 513 ntBASIC2.69□□□□□ -1.98
LDLRP01130 7SK.10-201ENST00000621414 298 ntBASIC2.69□□□□□ -1.98
LDLRP01130 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LDLRP01130 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LDLRP01130 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LDLRP01130 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
LDLRP01130 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LDLRP01130 RNU6-1309P-201ENST00000363305 108 ntBASIC2.68□□□□□ -1.98
LDLRP01130 Y_RNA.324-201ENST00000365165 102 ntBASIC2.68□□□□□ -1.98
LDLRP01130 RNU6-1280P-201ENST00000365211 107 ntBASIC2.68□□□□□ -1.98
LDLRP01130 Y_RNA.399-201ENST00000383955 105 ntBASIC2.68□□□□□ -1.98
LDLRP01130 SNORA70B-201ENST00000384210 135 ntBASIC2.68□□□□□ -1.98
LDLRP01130 Y_RNA.482-201ENST00000384377 111 ntBASIC2.68□□□□□ -1.98
LDLRP01130 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
LDLRP01130 MIR34A-201ENST00000385130 110 ntBASIC2.68□□□□□ -1.98
LDLRP01130 RNU6-907P-201ENST00000390924 102 ntBASIC2.68□□□□□ -1.98
LDLRP01130 AL512633.1-201ENST00000399931 655 ntBASIC2.68□□□□□ -1.98
LDLRP01130 Y_RNA.646-201ENST00000410980 101 ntBASIC2.68□□□□□ -1.98
LDLRP01130 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.68□□□□□ -1.98
LDLRP01130 NDUFB1P2-201ENST00000449477 176 ntBASIC2.68□□□□□ -1.98
LDLRP01130 RPL30P15-201ENST00000457129 321 ntBASIC2.68□□□□□ -1.98
LDLRP01130 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.68□□□□□ -1.98
LDLRP01130 AC117440.1-201ENST00000474107 571 ntBASIC2.68□□□□□ -1.98
LDLRP01130 RNU6-189P-201ENST00000516120 101 ntBASIC2.68□□□□□ -1.98
LDLRP01130 RN7SKP40-201ENST00000517211 242 ntBASIC2.68□□□□□ -1.98
LDLRP01130 COX6CP5-201ENST00000527162 228 ntBASIC2.68□□□□□ -1.98
LDLRP01130 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.68□□□□□ -1.98
LDLRP01130 AC006199.1-201ENST00000548728 219 ntBASIC2.68□□□□□ -1.98
LDLRP01130 AC090115.3-201ENST00000553218 849 ntBASIC2.68□□□□□ -1.98
LDLRP01130 AC025281.1-201ENST00000567026 265 ntBASIC2.68□□□□□ -1.98
LDLRP01130 MIR4503-201ENST00000582187 83 ntBASIC2.68□□□□□ -1.98
LDLRP01130 AC011890.2-201ENST00000613393 294 ntBASIC2.68□□□□□ -1.98
LDLRP01130 MIR7843-201ENST00000622274 79 ntBASIC2.68□□□□□ -1.98
LDLRP01130 AC138305.3-201ENST00000624988 240 ntBASIC2.68□□□□□ -1.98
LDLRP01130 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LDLRP01130 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LDLRP01130 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
LDLRP01130 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LDLRP01130 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LDLRP01130 RNU6-1115P-201ENST00000362490 106 ntBASIC2.67□□□□□ -1.98
LDLRP01130 RNU6-266P-201ENST00000364225 107 ntBASIC2.67□□□□□ -1.98
LDLRP01130 SNORA9.2-201ENST00000365361 133 ntBASIC2.67□□□□□ -1.98
LDLRP01130 RNU6-851P-201ENST00000384565 107 ntBASIC2.67□□□□□ -1.98
LDLRP01130 MIR518D-201ENST00000385014 87 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AL360182.1-201ENST00000397433 468 ntBASIC2.67□□□□□ -1.98
LDLRP01130 MIR548F4-201ENST00000408515 105 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AC018865.2-201ENST00000423631 129 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AL160004.2-201ENST00000432935 350 ntBASIC2.67□□□□□ -1.98
LDLRP01130 Y_RNA.653-201ENST00000459091 95 ntBASIC2.67□□□□□ -1.98
LDLRP01130 MIR2053-201ENST00000459295 91 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AC087884.1-201ENST00000469738 328 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AC079140.5-201ENST00000507882 310 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AC008526.1-201ENST00000509149 338 ntBASIC2.67□□□□□ -1.98
LDLRP01130 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.67□□□□□ -1.98
LDLRP01130 SCGB1D5P-201ENST00000515134 247 ntBASIC2.67□□□□□ -1.98
LDLRP01130 Y_RNA.687-201ENST00000516558 91 ntBASIC2.67□□□□□ -1.98
LDLRP01130 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.67□□□□□ -1.98
LDLRP01130 AL117187.1-201ENST00000555482 181 ntBASIC2.67□□□□□ -1.98
LDLRP01130 MIR4680-201ENST00000580906 66 ntBASIC2.67□□□□□ -1.98
LDLRP01130 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.67□□□□□ -1.98
LDLRP01130 RMST_4.1-201ENST00000616886 107 ntBASIC2.67□□□□□ -1.98
LDLRP01130 MIR6134-201ENST00000617606 109 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AC091925.1-201ENST00000623204 462 ntBASIC2.67□□□□□ -1.98
LDLRP01130 AL078596.1-201ENST00000624856 447 ntBASIC2.67□□□□□ -1.98
LDLRP01130 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
LDLRP01130 MTND5P30-201ENST00000452896 1731 ntBASIC2.67□□□□□ -1.98
LDLRP01130 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LDLRP01130 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.66□□□□□ -1.98
LDLRP01130 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LDLRP01130 MTND5P10-201ENST00000603719 1809 ntBASIC2.66□□□□□ -1.98
LDLRP01130 SNORA18.3-201ENST00000384122 132 ntBASIC2.66□□□□□ -1.98
LDLRP01130 Y_RNA.480-201ENST00000384364 102 ntBASIC2.66□□□□□ -1.98
LDLRP01130 RNU6-331P-201ENST00000384724 107 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR450B-201ENST00000401182 78 ntBASIC2.66□□□□□ -1.98
LDLRP01130 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.66□□□□□ -1.98
LDLRP01130 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.66□□□□□ -1.98
LDLRP01130 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
LDLRP01130 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms