Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC091163.3-201ENST00000518269 1144 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA1O95477 DEFB131D-201ENST00000526803 184 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC004812.1-201ENST00000540773 146 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC002400.1-201ENST00000569310 726 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC090578.1-201ENST00000604955 591 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 MIR520A-201ENST00000384862 85 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 BX664727.1-201ENST00000416024 466 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 HSPE1P9-201ENST00000440046 311 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 MTND4P25-201ENST00000441039 533 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC026414.1-201ENST00000504046 698 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 PSMC1P5-201ENST00000512850 177 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 RNA5SP255-201ENST00000516370 107 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC023632.1-201ENST00000518463 375 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AL512347.1-201ENST00000566420 503 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA1O95477 AC060771.1-201ENST00000582031 164 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 MIR3136-201ENST00000583498 78 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 HMGN1P30-201ENST00000589286 268 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC068790.6-201ENST00000602558 258 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 BNIP3P9-201ENST00000603714 553 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AL450270.1-201ENST00000606160 391 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 MIR8084-201ENST00000614105 89 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
ABCA1O95477 RNU6-97P-201ENST00000363387 104 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 RNU1-96P-201ENST00000364163 162 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 RNU6-622P-201ENST00000384272 103 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.32□□□□□ -2.36
ABCA1O95477 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.32□□□□□ -2.36
ABCA1O95477 RPL7P55-201ENST00000450522 746 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 RPS26P45-201ENST00000471748 340 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 RNU5A-4P-201ENST00000516588 111 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 RNU6-1092P-201ENST00000516955 87 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 AC093012.1-202ENST00000549403 582 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
ABCA1O95477 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 AL022154.1-201ENST00000604698 785 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 MIR1248-201ENST00000629190 106 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 AL159152.1-201ENST00000635019 2587 ntBASIC0.32□□□□□ -2.36
ABCA1O95477 RNU6-439P-201ENST00000384188 106 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 SNORA12-201ENST00000391162 147 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AC016831.2-201ENST00000417179 352 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 ARL5AP1-201ENST00000418991 388 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 TIMM9P2-201ENST00000419324 266 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA1O95477 MTND4LP7-201ENST00000431728 294 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 SEPT7P5-201ENST00000434048 306 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA1O95477 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA1O95477 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.31□□□□□ -2.36
ABCA1O95477 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA1O95477 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.31□□□□□ -2.36
ABCA1O95477 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.31□□□□□ -2.36
ABCA1O95477 MIR1273C-201ENST00000578669 77 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AC013470.4-201ENST00000619978 986 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.31□□□□□ -2.36
ABCA1O95477 RNA5SP327-201ENST00000362494 101 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 Y_RNA.136-201ENST00000363444 102 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 RNU6-395P-201ENST00000365662 106 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 MRPL35P1-201ENST00000404272 572 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 RNA5SP390-201ENST00000410191 113 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AL359704.1-201ENST00000411586 781 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 UBE2V1P10-201ENST00000414685 269 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AL590556.1-201ENST00000423231 483 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AL589872.1-201ENST00000426602 288 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA1O95477 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.31□□□□□ -2.36
ABCA1O95477 MTND5P14-201ENST00000441481 1267 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.31□□□□□ -2.36
ABCA1O95477 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.31□□□□□ -2.36
ABCA1O95477 AC010631.1-201ENST00000474150 156 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AC011005.2-201ENST00000487324 359 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 SNORD60.2-201ENST00000516883 86 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
ABCA1O95477 MIR4305-201ENST00000583252 102 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 Z83818.1-201ENST00000603584 150 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AL159153.1-201ENST00000619688 317 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AC093648.1-201ENST00000623546 606 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AC068205.3-201ENST00000636385 468 ntBASIC0.31□□□□□ -2.36
ABCA1O95477 AC068533.2-201ENST00000411872 306 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AL022718.1-201ENST00000412004 84 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 MTCO1P3-201ENST00000429327 192 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 RPL18AP17-201ENST00000455326 198 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA1O95477 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA1O95477 RNU6-567P-201ENST00000516746 107 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.3□□□□□ -2.36
ABCA1O95477 AC087897.1-201ENST00000550134 156 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA1O95477 MIR5708-201ENST00000579723 85 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.3□□□□□ -2.36
ABCA1O95477 AC004987.4-201ENST00000603383 338 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AC120349.3-201ENST00000624377 529 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 RNU6-1065P-201ENST00000384513 106 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AC009518.2-201ENST00000418056 731 ntBASIC0.3□□□□□ -2.36
ABCA1O95477 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA1O95477 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.3□□□□□ -2.36
ABCA1O95477 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms