Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKL5O76039 U8.21-201ENST00000459536 136 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 RN7SL499P-201ENST00000481141 276 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 RNU7-4P-201ENST00000516961 62 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AP005902.1-201ENST00000521358 186 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR5696-201ENST00000578474 85 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR5701-3-201ENST00000578890 82 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR5701-1-201ENST00000585138 82 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AL645944.1-201ENST00000603857 493 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AL161756.2-201ENST00000604597 246 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AC090115.4-201ENST00000609970 188 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR8076-201ENST00000611401 83 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AC004852.3-201ENST00000614131 326 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR5701-2-201ENST00000615634 82 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AC091953.5-201ENST00000622919 233 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL5O76039 MTND5P9-201ENST00000503854 1755 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 ZNF299P-201ENST00000406845 1804 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL5O76039 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CDKL5O76039 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CDKL5O76039 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL5O76039 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
CDKL5O76039 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDKL5O76039 Y_RNA.152-201ENST00000363578 100 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 Y_RNA.307-201ENST00000365022 117 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 Y_RNA.556-201ENST00000384677 113 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 MIR625-201ENST00000385047 85 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 AC098614.2-201ENST00000426040 255 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 MTND3P9-201ENST00000429526 346 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 AC092423.1-201ENST00000430165 186 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 RPL23AP83-201ENST00000434984 473 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 Z82210.1-201ENST00000440037 231 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 RPS3AP12-201ENST00000443616 753 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 OSTCP8-201ENST00000445117 448 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 AC013470.1-201ENST00000453438 462 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 snoU109.2-201ENST00000459316 135 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 AK3P2-201ENST00000507976 429 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKL5O76039 SCGB1D5P-201ENST00000515134 247 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 RNA5SP341-201ENST00000516261 117 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 RNU6-56P-201ENST00000516986 93 ntBASIC3.36□□□□□ -1.87
CDKL5O76039 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.36□□□□□ -1.87
CDKL5O76039 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKL5O76039 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.36□□□□□ -1.87
CDKL5O76039 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDKL5O76039 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDKL5O76039 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CDKL5O76039 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDKL5O76039 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDKL5O76039 SNORD50.1-201ENST00000362987 71 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 RNU6-595P-201ENST00000363944 107 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 RNU1-140P-201ENST00000365040 165 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 Y_RNA.476-201ENST00000384347 108 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 MIR493-201ENST00000385254 89 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDKL5O76039 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.35□□□□□ -1.87
CDKL5O76039 EIF4EP2-201ENST00000422816 654 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 SNRPEP9-201ENST00000436794 238 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.35□□□□□ -1.87
CDKL5O76039 MTCO3P8-201ENST00000453691 755 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 RPS29P27-201ENST00000463711 170 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL5O76039 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.35□□□□□ -1.87
CDKL5O76039 RNU6-612P-201ENST00000516909 102 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 RN7SKP57-201ENST00000517248 293 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.35□□□□□ -1.87
CDKL5O76039 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.35□□□□□ -1.87
CDKL5O76039 MIR4325-201ENST00000583049 90 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 VN1R91P-201ENST00000594377 169 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 RAC1P9-201ENST00000604990 392 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL5O76039 AL162274.2-201ENST00000614406 332 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 MIR8062-201ENST00000621515 85 ntBASIC3.35□□□□□ -1.87
CDKL5O76039 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL5O76039 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL5O76039 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL5O76039 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
CDKL5O76039 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL5O76039 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL5O76039 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL5O76039 Y_RNA.26-201ENST00000362539 101 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 RNU6-379P-201ENST00000363813 104 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 RNU6-472P-201ENST00000384299 107 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 MIR34A-201ENST00000385130 110 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL5O76039 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL5O76039 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.34□□□□□ -1.87
CDKL5O76039 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL5O76039 AC073910.1-201ENST00000445047 438 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 AC079354.2-201ENST00000453523 154 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL5O76039 AC093852.1-201ENST00000503587 266 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL5O76039 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL5O76039 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL5O76039 AC005046.1-201ENST00000608515 625 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 AC062037.2-201ENST00000610137 73 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 AC009318.2-201ENST00000610917 651 ntBASIC3.34□□□□□ -1.87
CDKL5O76039 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms