Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RMST_7.1-201ENST00000621935 268 ntBASIC2.18□□□□□ -2.06
CSDE1O75534 AC012640.5-201ENST00000623897 319 ntBASIC2.18□□□□□ -2.06
CSDE1O75534 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CSDE1O75534 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CSDE1O75534 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
CSDE1O75534 RNU6-212P-201ENST00000362642 104 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 RNU6-487P-201ENST00000365430 104 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 Y_RNA.399-201ENST00000383955 105 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AL590002.1-201ENST00000406554 418 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 RNU2-20P-201ENST00000410425 191 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.17□□□□□ -2.06
CSDE1O75534 SEPT14P3-201ENST00000439401 183 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AL161788.1-201ENST00000441805 169 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC009238.1-201ENST00000442165 424 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AL732372.2-207ENST00000445840 183 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC009237.6-201ENST00000446969 424 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
CSDE1O75534 SEPT14P2-201ENST00000453405 183 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 HMGN2P23-201ENST00000456759 269 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 RPL7P43-201ENST00000478876 753 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC019235.1-201ENST00000503847 207 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.17□□□□□ -2.06
CSDE1O75534 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.17□□□□□ -2.06
CSDE1O75534 SEPT14P4-201ENST00000513445 186 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 RNU6-377P-201ENST00000515965 102 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 SNORA25.17-201ENST00000517184 124 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 SNORA31.23-201ENST00000517219 133 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 FO082796.1-201ENST00000523795 183 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.17□□□□□ -2.06
CSDE1O75534 AC136619.2-201ENST00000563361 631 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 HMGB1P33-201ENST00000563485 527 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 DEFB122-202ENST00000569013 197 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 MIR3941-201ENST00000582572 103 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.17□□□□□ -2.06
CSDE1O75534 AF250324.2-201ENST00000608299 610 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 MIR6845-201ENST00000613182 61 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC008121.3-201ENST00000618726 433 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AC139792.2-201ENST00000624218 587 ntBASIC2.17□□□□□ -2.06
CSDE1O75534 AP006437.1-201ENST00000641440 3685 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNU1-148P-201ENST00000384472 162 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNU1-57P-201ENST00000384491 166 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNU6-1245P-201ENST00000411130 106 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.16□□□□□ -2.06
CSDE1O75534 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSDE1O75534 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.16□□□□□ -2.06
CSDE1O75534 TPTE2P5-203ENST00000458118 728 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 MTCO3P38-201ENST00000468910 766 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RPL30P12-201ENST00000474666 353 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 AC091435.1-201ENST00000505442 584 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNU6-237P-201ENST00000515985 71 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNU6-720P-201ENST00000516363 108 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 RNU6-835P-201ENST00000516974 104 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 AC016957.1-201ENST00000534895 309 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 MTCO3P23-201ENST00000561363 289 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.16□□□□□ -2.06
CSDE1O75534 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.16□□□□□ -2.06
CSDE1O75534 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.16□□□□□ -2.06
CSDE1O75534 MIR3126-201ENST00000577443 74 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 AC090897.2-201ENST00000581715 130 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 AC011494.1-201ENST00000596454 237 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 VN1R80P-201ENST00000597126 338 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 AC092747.3-201ENST00000603769 301 ntBASIC2.16□□□□□ -2.06
CSDE1O75534 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CSDE1O75534 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CSDE1O75534 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSDE1O75534 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 Y_RNA.3-201ENST00000362331 103 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 RNU6-483P-201ENST00000384088 108 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 RNU6-622P-201ENST00000384272 103 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 SNORD56-201ENST00000413522 71 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.15□□□□□ -2.07
CSDE1O75534 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.15□□□□□ -2.07
CSDE1O75534 AP001025.1-201ENST00000486139 332 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 RPL23AP63-201ENST00000498752 471 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 MTCYBP40-201ENST00000509390 1135 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.15□□□□□ -2.07
CSDE1O75534 RNU6-189P-201ENST00000516120 101 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.15□□□□□ -2.07
CSDE1O75534 CENPUP1-201ENST00000526649 1202 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.15□□□□□ -2.07
CSDE1O75534 MIR4424-201ENST00000585257 86 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 AL162413.1-201ENST00000603198 110 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 APOOP1-201ENST00000604695 592 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 RNU6-85P-201ENST00000605989 107 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CSDE1O75534 uc_338.15-201ENST00000615470 191 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 U4.7-201ENST00000638126 106 ntBASIC2.15□□□□□ -2.07
CSDE1O75534 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSDE1O75534 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CSDE1O75534 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSDE1O75534 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.14□□□□□ -2.07
CSDE1O75534 RNU6-1010P-201ENST00000362757 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms