Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BX284668.6-201ENST00000606899 438 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC009237.15-201ENST00000610252 501 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC018755.4-201ENST00000619715 454 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RNU6-650P-201ENST00000365658 111 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RNU6-756P-201ENST00000383997 107 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 MIR643-201ENST00000385267 97 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AF213884.2-201ENST00000510417 903 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RNU6-581P-201ENST00000516214 105 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.2□□□□□ -2.44
USH2AO75445 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 NAMPTP3-201ENST00000569273 224 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC013468.1-201ENST00000608680 598 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL391834.1-201ENST00000609609 560 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC112204.3-201ENST00000623822 332 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
USH2AO75445 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 MIR561-201ENST00000385216 97 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 U6atac.2-201ENST00000408644 118 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 BX664727.1-201ENST00000416024 466 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 MTCO2P20-201ENST00000437339 673 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 AL606662.1-201ENST00000445763 553 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.2□□□□□ -2.44
USH2AO75445 RNY4P37-201ENST00000516225 96 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 SUMO2P16-201ENST00000519475 264 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 HAUS1P3-201ENST00000523909 662 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AP001330.4-201ENST00000604350 154 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL391099.1-201ENST00000624635 187 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC-0.21□□□□□ -2.44
USH2AO75445 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.21□□□□□ -2.44
USH2AO75445 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.21□□□□□ -2.44
USH2AO75445 AC112187.2-201ENST00000604345 283 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC011921.3-201ENST00000605540 361 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC013476.2-201ENST00000614456 459 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
USH2AO75445 AL589655.1-201ENST00000405398 482 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 MTND1P14-201ENST00000427400 950 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 CALM2P2-201ENST00000428512 440 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC-0.21□□□□□ -2.44
USH2AO75445 RNA5SP484-201ENST00000458857 111 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC104689.1-201ENST00000473356 768 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 ZNF705CP-201ENST00000530515 889 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 MIR4770-201ENST00000579149 58 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC010738.1-201ENST00000604970 987 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC105129.3-201ENST00000605455 485 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC110792.4-201ENST00000609843 298 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AP003072.4-201ENST00000624580 310 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 MIR7157-201ENST00000635801 60 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC100810.6-201ENST00000638068 285 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC-0.21□□□□□ -2.44
USH2AO75445 MIR101-2-201ENST00000362195 79 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 MIR767-201ENST00000390228 109 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 RNU7-90P-201ENST00000459216 62 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC022616.3-201ENST00000523940 148 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC-0.21□□□□□ -2.44
USH2AO75445 MIR548AD-201ENST00000584780 82 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.21□□□□□ -2.44
USH2AO75445 AC034236.3-201ENST00000605999 461 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC011939.3-201ENST00000613686 466 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 RNU6-226P-201ENST00000363778 107 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 SNORA75.2-201ENST00000391138 150 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AF228730.1-201ENST00000397972 663 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AL136310.1-201ENST00000404926 654 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AL606923.1-201ENST00000406616 190 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 RPL26P27-201ENST00000414397 437 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 RAC1P7-201ENST00000445367 377 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC002381.1-201ENST00000447049 280 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.21□□□□□ -2.44
USH2AO75445 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.21□□□□□ -2.44
USH2AO75445 AC117525.1-201ENST00000515228 503 ntBASIC-0.21□□□□□ -2.44
USH2AO75445 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC-0.21□□□□□ -2.44
USH2AO75445 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.21□□□□□ -2.44
USH2AO75445 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC-0.21□□□□□ -2.44
USH2AO75445 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 MTCO2P31-201ENST00000402702 684 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.22□□□□□ -2.44
USH2AO75445 AC245102.2-201ENST00000448956 180 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 MTND1P17-201ENST00000448961 204 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.22□□□□□ -2.44
USH2AO75445 U7.7-201ENST00000459276 60 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.22□□□□□ -2.44
USH2AO75445 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC-0.22□□□□□ -2.44
USH2AO75445 AC117490.2-201ENST00000610042 594 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 MIR6129-201ENST00000616087 109 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 MIR302D-201ENST00000362275 68 ntBASIC-0.22□□□□□ -2.44
USH2AO75445 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms