Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.21□□□□□ -2.22
SHOX2O60902 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.21□□□□□ -2.22
SHOX2O60902 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.21□□□□□ -2.22
SHOX2O60902 RPL37P21-201ENST00000435890 276 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 AC087477.1-201ENST00000465747 340 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 RPL30P12-201ENST00000474666 353 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.21□□□□□ -2.22
SHOX2O60902 SNORA31.17-201ENST00000516953 127 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.21□□□□□ -2.22
SHOX2O60902 AC115990.1-201ENST00000526957 301 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.21□□□□□ -2.22
SHOX2O60902 MIR3118-1-201ENST00000581787 76 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 AC013244.3-201ENST00000605614 388 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 AC026585.1-201ENST00000619582 524 ntBASIC1.21□□□□□ -2.22
SHOX2O60902 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SHOX2O60902 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SHOX2O60902 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.2□□□□□ -2.22
SHOX2O60902 ZNF29P-201ENST00000225587 168 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 Y_RNA.18-201ENST00000362461 102 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 SNORD56.2-201ENST00000363242 71 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SHOX2O60902 RNU6-439P-201ENST00000384188 106 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 RNU1-139P-201ENST00000391307 165 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.2□□□□□ -2.22
SHOX2O60902 EBAG9P1-201ENST00000418955 543 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 RPS27AP14-201ENST00000422868 454 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 FTH1P12-201ENST00000432137 551 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 RPL39P29-201ENST00000447779 157 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 USP9YP25-201ENST00000457708 443 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 RNU1-131P-201ENST00000458943 161 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 MTCO2P29-201ENST00000465212 189 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AC005908.1-201ENST00000468701 347 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AP000797.1-201ENST00000478870 387 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AC010409.1-201ENST00000487382 476 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.2□□□□□ -2.22
SHOX2O60902 AC116347.2-201ENST00000514912 523 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.2□□□□□ -2.22
SHOX2O60902 MIR4509-3-201ENST00000578671 94 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 MIR4509-2-201ENST00000583920 94 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 DEFB131E-202ENST00000602581 683 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AC092106.3-201ENST00000611308 722 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 AC063943.3-201ENST00000615562 356 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 MIR4509-1-201ENST00000618224 94 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.2□□□□□ -2.22
SHOX2O60902 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
SHOX2O60902 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SHOX2O60902 Y_RNA.97-201ENST00000363094 102 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 RNU6-414P-201ENST00000363705 104 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 RNU6-384P-201ENST00000364900 104 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 SNORD115.1-201ENST00000391109 76 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.19□□□□□ -2.22
SHOX2O60902 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.19□□□□□ -2.22
SHOX2O60902 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 AC112204.1-201ENST00000502591 103 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.19□□□□□ -2.22
SHOX2O60902 AC009646.1-201ENST00000510455 318 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.19□□□□□ -2.22
SHOX2O60902 RNU1-92P-201ENST00000517017 135 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 AC002400.1-201ENST00000569310 726 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.19□□□□□ -2.22
SHOX2O60902 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 MIR98-201ENST00000606724 119 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 RNU4-5P-201ENST00000607255 135 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 AL157392.4-201ENST00000609756 345 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 RMST_7.1-201ENST00000621935 268 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 AC006927.4-201ENST00000639187 543 ntBASIC1.19□□□□□ -2.22
SHOX2O60902 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.19□□□□□ -2.22
SHOX2O60902 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SHOX2O60902 LINC02555-201ENST00000563933 1951 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 RNU6-1222P-201ENST00000384615 107 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 MIR578-201ENST00000384828 96 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.18□□□□□ -2.22
SHOX2O60902 AC007969.2-201ENST00000441891 191 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.18□□□□□ -2.22
SHOX2O60902 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.18□□□□□ -2.22
SHOX2O60902 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.18□□□□□ -2.22
SHOX2O60902 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.18□□□□□ -2.22
SHOX2O60902 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
SHOX2O60902 AL356057.1-201ENST00000533798 831 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AP003034.1-201ENST00000534621 422 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.18□□□□□ -2.22
SHOX2O60902 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.18□□□□□ -2.22
SHOX2O60902 AL161670.1-201ENST00000554348 137 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.18□□□□□ -2.22
SHOX2O60902 MIR5697-201ENST00000578045 78 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms