Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC012493.2-201ENST00000595083 291 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AC078899.3-201ENST00000599065 212 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.38□□□□□ -1.87
KDM1AO60341 AC096772.1-201ENST00000609146 564 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AL359198.2-201ENST00000611836 194 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 RMST_6.1-201ENST00000611980 203 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AC007792.1-201ENST00000623023 402 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AC243829.7-201ENST00000633081 225 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
KDM1AO60341 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
KDM1AO60341 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
KDM1AO60341 AC017071.1-201ENST00000564407 2204 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KDM1AO60341 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
KDM1AO60341 Y_RNA.106-201ENST00000363189 100 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 Y_RNA.153-201ENST00000363615 91 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 Y_RNA.557-201ENST00000384680 107 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 RNA5SP354-201ENST00000391247 136 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 HMGB3P2-201ENST00000411913 584 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 MTCO3P19-201ENST00000415864 321 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 CYCSP48-201ENST00000417124 323 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
KDM1AO60341 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.37□□□□□ -1.87
KDM1AO60341 MTATP8P1-201ENST00000467115 207 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.37□□□□□ -1.87
KDM1AO60341 AC115990.1-201ENST00000526957 301 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 AC040926.1-201ENST00000530195 238 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.37□□□□□ -1.87
KDM1AO60341 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.37□□□□□ -1.87
KDM1AO60341 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.37□□□□□ -1.87
KDM1AO60341 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.37□□□□□ -1.87
KDM1AO60341 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.37□□□□□ -1.87
KDM1AO60341 AC124312.5-201ENST00000604451 268 ntBASIC3.37□□□□□ -1.87
KDM1AO60341 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.37□□□□□ -1.87
KDM1AO60341 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
KDM1AO60341 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KDM1AO60341 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.36□□□□□ -1.87
KDM1AO60341 RNA5SP119-201ENST00000362715 117 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 RNU6-1010P-201ENST00000362757 107 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 RNA5SP72-201ENST00000364442 117 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 Y_RNA.358-201ENST00000365491 99 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 Y_RNA.380-201ENST00000365663 111 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 SNORA36A-201ENST00000384221 132 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 RNU6-17P-201ENST00000384245 107 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 RNU6-18P-201ENST00000384527 107 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 MIR670-201ENST00000390142 98 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AC138623.1-201ENST00000418060 216 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 DPH3P2-201ENST00000422618 250 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 RPL23AP22-201ENST00000437556 453 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.36□□□□□ -1.87
KDM1AO60341 RPS4XP2-201ENST00000458402 793 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 RNU7-87P-201ENST00000459343 62 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AP001324.2-201ENST00000461163 319 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 ANXA2P1-201ENST00000505539 926 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.36□□□□□ -1.87
KDM1AO60341 SNORA70.18-201ENST00000516696 98 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KDM1AO60341 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.36□□□□□ -1.87
KDM1AO60341 MIR4429-201ENST00000580105 73 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AL355297.3-201ENST00000604082 446 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AP000942.4-201ENST00000604811 241 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AL137843.1-201ENST00000605078 385 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AC069200.1-201ENST00000609511 323 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AL159153.1-201ENST00000619688 317 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AC022149.2-201ENST00000621061 203 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 AC091903.1-201ENST00000624322 454 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.36□□□□□ -1.87
KDM1AO60341 AL450472.1-202ENST00000637286 180 ntBASIC3.36□□□□□ -1.87
KDM1AO60341 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KDM1AO60341 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.36□□□□□ -1.87
KDM1AO60341 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KDM1AO60341 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KDM1AO60341 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KDM1AO60341 RNU6-212P-201ENST00000362642 104 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 U8.9-201ENST00000365667 134 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 MIR32-201ENST00000384965 70 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 MIR153-2-201ENST00000385225 87 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 U3.19-201ENST00000390893 196 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.35□□□□□ -1.87
KDM1AO60341 RPL21P2-201ENST00000440049 481 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 AL358232.1-201ENST00000448030 501 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 MTCO3P8-201ENST00000453691 755 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 U8.20-201ENST00000459445 131 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.35□□□□□ -1.87
KDM1AO60341 Y_RNA.715-201ENST00000517082 110 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.35□□□□□ -1.87
KDM1AO60341 AC007458.1-201ENST00000542812 373 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 MIR3944-201ENST00000581277 108 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.35□□□□□ -1.87
KDM1AO60341 uc_338.14-201ENST00000613162 166 ntBASIC3.35□□□□□ -1.87
KDM1AO60341 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KDM1AO60341 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KDM1AO60341 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.87
KDM1AO60341 AC008264.2-201ENST00000610193 3731 ntBASIC3.34□□□□□ -1.87
KDM1AO60341 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.34□□□□□ -1.87
KDM1AO60341 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms