Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC091152.3-201ENST00000604227 325 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AC019159.1-201ENST00000605094 187 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AC107871.2-201ENST00000612894 502 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AC098657.3-201ENST00000620434 263 ntBASIC2.46□□□□□ -2.02
PRKNO60260 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AC010889.1-201ENST00000566193 2666 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AC138915.1-201ENST00000565427 1685 ntBASIC2.46□□□□□ -2.02
PRKNO60260 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.46□□□□□ -2.02
PRKNO60260 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PRKNO60260 AC008669.1-201ENST00000565823 2178 ntBASIC2.46□□□□□ -2.02
PRKNO60260 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKNO60260 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PRKNO60260 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.45□□□□□ -2.02
PRKNO60260 SNORA51.4-201ENST00000364993 124 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RNU6-842P-201ENST00000384269 107 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RNU6-19P-201ENST00000384718 107 ntBASIC2.45□□□□□ -2.02
PRKNO60260 MIR196B-201ENST00000384852 84 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RPL21P75-201ENST00000396599 483 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RPL21P28-201ENST00000401418 483 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RPS29P13-201ENST00000402041 169 ntBASIC2.45□□□□□ -2.02
PRKNO60260 PTGES3P4-201ENST00000426243 356 ntBASIC2.45□□□□□ -2.02
PRKNO60260 SAR1AP4-201ENST00000429225 591 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.45□□□□□ -2.02
PRKNO60260 DAP3P1-201ENST00000441522 278 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.45□□□□□ -2.02
PRKNO60260 AC007677.1-201ENST00000445757 515 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RPL21P39-201ENST00000463605 483 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC008571.1-201ENST00000467232 300 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC087190.1-201ENST00000484462 480 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC093591.1-201ENST00000491435 481 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RPS27P26-201ENST00000494583 239 ntBASIC2.45□□□□□ -2.02
PRKNO60260 RPL21P16-201ENST00000495531 483 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC005741.1-201ENST00000511094 432 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.45□□□□□ -2.02
PRKNO60260 SNORA31.18-201ENST00000517043 134 ntBASIC2.45□□□□□ -2.02
PRKNO60260 CR383656.8-201ENST00000549046 145 ntBASIC2.45□□□□□ -2.02
PRKNO60260 ANP32BP3-201ENST00000559213 706 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC109446.1-201ENST00000566172 220 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AC025281.1-201ENST00000567026 265 ntBASIC2.45□□□□□ -2.02
PRKNO60260 CPDP1-201ENST00000579660 283 ntBASIC2.45□□□□□ -2.02
PRKNO60260 AL355877.2-201ENST00000603670 358 ntBASIC2.45□□□□□ -2.02
PRKNO60260 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.45□□□□□ -2.02
PRKNO60260 AC080078.3-201ENST00000605407 463 ntBASIC2.45□□□□□ -2.02
PRKNO60260 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.45□□□□□ -2.02
PRKNO60260 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PRKNO60260 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKNO60260 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
PRKNO60260 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKNO60260 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKNO60260 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PRKNO60260 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKNO60260 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PRKNO60260 RNU1-105P-201ENST00000363470 161 ntBASIC2.44□□□□□ -2.02
PRKNO60260 Y_RNA.315-201ENST00000365117 102 ntBASIC2.44□□□□□ -2.02
PRKNO60260 RNU6-43P-201ENST00000384302 107 ntBASIC2.44□□□□□ -2.02
PRKNO60260 RNU6-692P-201ENST00000384496 107 ntBASIC2.44□□□□□ -2.02
PRKNO60260 RNU6-331P-201ENST00000384724 107 ntBASIC2.44□□□□□ -2.02
PRKNO60260 RNU6-750P-201ENST00000390946 107 ntBASIC2.44□□□□□ -2.02
PRKNO60260 RNA5SP354-201ENST00000391247 136 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKNO60260 AC074117.2-201ENST00000417130 397 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AC124916.1-201ENST00000444020 547 ntBASIC2.44□□□□□ -2.02
PRKNO60260 Z96811.1-201ENST00000445880 108 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AC133134.1-201ENST00000466800 359 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AC027575.1-201ENST00000481064 460 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.44□□□□□ -2.02
PRKNO60260 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKNO60260 AC093303.1-201ENST00000514549 295 ntBASIC2.44□□□□□ -2.02
PRKNO60260 RNU5F-8P-201ENST00000515941 111 ntBASIC2.44□□□□□ -2.02
PRKNO60260 ACA59.1-201ENST00000515966 143 ntBASIC2.44□□□□□ -2.02
PRKNO60260 SNORD19.2-201ENST00000516978 73 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AP005902.1-201ENST00000521358 186 ntBASIC2.44□□□□□ -2.02
PRKNO60260 CKS1BP7-201ENST00000522230 235 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AC018889.1-201ENST00000605372 397 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AC092608.2-201ENST00000624427 218 ntBASIC2.44□□□□□ -2.02
PRKNO60260 AC241585.2-209ENST00000638217 143 ntBASIC2.44□□□□□ -2.02
PRKNO60260 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.44□□□□□ -2.02
PRKNO60260 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKNO60260 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKNO60260 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.43□□□□□ -2.02
PRKNO60260 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PRKNO60260 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PRKNO60260 U8.8-201ENST00000365399 135 ntBASIC2.43□□□□□ -2.02
PRKNO60260 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PRKNO60260 AL133475.1-201ENST00000404414 305 ntBASIC2.43□□□□□ -2.02
PRKNO60260 RNU6-1245P-201ENST00000411130 106 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AL354751.2-201ENST00000415471 210 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AC096649.2-201ENST00000416186 393 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.43□□□□□ -2.02
PRKNO60260 AC009414.1-201ENST00000427200 443 ntBASIC2.43□□□□□ -2.02
PRKNO60260 MTCO2P12-201ENST00000427426 682 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AC243964.1-201ENST00000441814 261 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKNO60260 AC107626.1-201ENST00000471084 183 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.43□□□□□ -2.02
PRKNO60260 AC097473.1-201ENST00000508142 408 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKNO60260 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKNO60260 SCARNA16.2-201ENST00000516520 172 ntBASIC2.43□□□□□ -2.02
PRKNO60260 RNA5SP384-201ENST00000516615 116 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms