Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 RNU6-266P-201ENST00000364225 107 ntBASIC2□□□□□ -2.09
VEGFDO43915 RNU6-336P-201ENST00000364891 107 ntBASIC2□□□□□ -2.09
VEGFDO43915 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VEGFDO43915 RNY3P9-201ENST00000384727 106 ntBASIC2□□□□□ -2.09
VEGFDO43915 RNU6-1106P-201ENST00000390845 107 ntBASIC2□□□□□ -2.09
VEGFDO43915 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2□□□□□ -2.09
VEGFDO43915 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2□□□□□ -2.09
VEGFDO43915 RNU6-237P-201ENST00000515985 71 ntBASIC2□□□□□ -2.09
VEGFDO43915 TRAV32-201ENST00000553993 340 ntBASIC2□□□□□ -2.09
VEGFDO43915 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2□□□□□ -2.09
VEGFDO43915 CYP2C61P-201ENST00000604072 290 ntBASIC2□□□□□ -2.09
VEGFDO43915 APOOP1-201ENST00000604695 592 ntBASIC2□□□□□ -2.09
VEGFDO43915 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2□□□□□ -2.09
VEGFDO43915 AL773524.1-201ENST00000614065 229 ntBASIC2□□□□□ -2.09
VEGFDO43915 AC063943.3-201ENST00000615562 356 ntBASIC2□□□□□ -2.09
VEGFDO43915 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
VEGFDO43915 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
VEGFDO43915 AC092268.1-201ENST00000342691 405 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AL356432.1-201ENST00000405809 419 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AL357139.1-201ENST00000407792 426 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 MIR1262-201ENST00000408276 93 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 RN7SKP61-201ENST00000410642 295 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AL139156.1-201ENST00000412785 841 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AL117339.3-201ENST00000418733 162 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 SRIP2-201ENST00000428470 166 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.99□□□□□ -2.09
VEGFDO43915 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.99□□□□□ -2.09
VEGFDO43915 AC244670.1-201ENST00000436879 112 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 RPL38P4-201ENST00000502376 214 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 HMGB1P29-201ENST00000505659 499 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.99□□□□□ -2.09
VEGFDO43915 RNU6-965P-201ENST00000516721 96 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.99□□□□□ -2.09
VEGFDO43915 DEFB122-202ENST00000569013 197 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AC002044.1-201ENST00000606707 158 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 AL022345.1-201ENST00000607292 135 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.99□□□□□ -2.09
VEGFDO43915 SNORD98-201ENST00000636377 67 ntBASIC1.99□□□□□ -2.09
VEGFDO43915 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 RNA5SP276-201ENST00000362580 94 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 RNU6-996P-201ENST00000365438 107 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 SNORA75-201ENST00000384158 137 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 RNU6-43P-201ENST00000384302 107 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AF228730.1-201ENST00000397972 663 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 RNU2-2P-201ENST00000410396 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 EIF4EP2-201ENST00000422816 654 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC010975.2-201ENST00000427781 588 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.98□□□□□ -2.09
VEGFDO43915 HMGN2P3-201ENST00000433603 273 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 HMGN2P5-201ENST00000436882 273 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 snoU13.23-201ENST00000458863 104 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AK3P2-201ENST00000507976 429 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.98□□□□□ -2.09
VEGFDO43915 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.98□□□□□ -2.09
VEGFDO43915 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.98□□□□□ -2.09
VEGFDO43915 HIF1AP1-201ENST00000553642 175 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.98□□□□□ -2.09
VEGFDO43915 MTND3P12-201ENST00000559068 328 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC004223.2-201ENST00000590309 544 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC009314.1-201ENST00000603871 304 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AC123912.5-201ENST00000605470 343 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.15-201ENST00000611544 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.16-201ENST00000613119 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.12-201ENST00000613778 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.9-201ENST00000615427 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.11-201ENST00000616345 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.2-201ENST00000616535 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.3-201ENST00000617785 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.19-201ENST00000618602 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 RNU2-1-201ENST00000618664 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.6-201ENST00000619225 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.5-201ENST00000619465 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 U2.10-201ENST00000620268 191 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.98□□□□□ -2.09
VEGFDO43915 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VEGFDO43915 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
VEGFDO43915 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.98□□□□□ -2.09
VEGFDO43915 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
VEGFDO43915 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
VEGFDO43915 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VEGFDO43915 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.97□□□□□ -2.09
VEGFDO43915 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VEGFDO43915 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VEGFDO43915 Y_RNA.159-201ENST00000363674 87 ntBASIC1.97□□□□□ -2.09
VEGFDO43915 SNORA8-201ENST00000384574 139 ntBASIC1.97□□□□□ -2.09
VEGFDO43915 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VEGFDO43915 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VEGFDO43915 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
VEGFDO43915 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms