Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 RNU1-109P-201ENST00000383960 147 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 RNU6-1032P-201ENST00000384100 107 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 SNORA29-201ENST00000384183 140 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 MT-TD-201ENST00000387419 68 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 UBA52P6-201ENST00000399822 382 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 RNU6-1050P-201ENST00000410388 107 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 RNA5SP494-201ENST00000410653 129 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.11□□□□□ -1.91
TSPAN6O43657 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.11□□□□□ -1.91
TSPAN6O43657 AC090096.1-201ENST00000489168 390 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.11□□□□□ -1.91
TSPAN6O43657 AC145146.1-201ENST00000496370 254 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.11□□□□□ -1.91
TSPAN6O43657 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.11□□□□□ -1.91
TSPAN6O43657 RPL23AP88-201ENST00000605759 454 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 U1.23-201ENST00000610293 146 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 AC009318.2-201ENST00000610917 651 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 RNU1-68P-201ENST00000615382 146 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 U1.39-201ENST00000621562 146 ntBASIC3.11□□□□□ -1.91
TSPAN6O43657 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.11□□□□□ -1.91
TSPAN6O43657 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.11□□□□□ -1.91
TSPAN6O43657 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TSPAN6O43657 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TSPAN6O43657 SNORA71.1-201ENST00000364523 117 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 RNU6-1274P-201ENST00000384557 107 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 MTCYBP2-201ENST00000407745 171 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 RNU6-174P-201ENST00000410406 106 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 CBX3P6-201ENST00000430257 527 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 AC021146.2-201ENST00000504736 556 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 AC026782.1-201ENST00000512952 449 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
TSPAN6O43657 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.1□□□□□ -1.91
TSPAN6O43657 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.1□□□□□ -1.91
TSPAN6O43657 AC005899.2-201ENST00000584353 90 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 Y_RNA.804-201ENST00000615262 101 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 AL450472.1-202ENST00000637286 180 ntBASIC3.1□□□□□ -1.91
TSPAN6O43657 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TSPAN6O43657 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TSPAN6O43657 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.1□□□□□ -1.91
TSPAN6O43657 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.1□□□□□ -1.91
TSPAN6O43657 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
TSPAN6O43657 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.91
TSPAN6O43657 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TSPAN6O43657 RNU4-15P-201ENST00000362613 141 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.09□□□□□ -1.91
TSPAN6O43657 RN7SL442P-201ENST00000473804 320 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.09□□□□□ -1.91
TSPAN6O43657 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 FGF7P4-201ENST00000509595 295 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.09□□□□□ -1.91
TSPAN6O43657 SNORA64.4-201ENST00000516632 81 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.09□□□□□ -1.91
TSPAN6O43657 MIR5690-201ENST00000583739 73 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 AC011494.1-201ENST00000596454 237 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 AC016727.1-205ENST00000605437 569 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 AC009994.1-201ENST00000606889 253 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 AC093732.2-201ENST00000607950 274 ntBASIC3.09□□□□□ -1.91
TSPAN6O43657 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TSPAN6O43657 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
TSPAN6O43657 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
TSPAN6O43657 Z82209.1-201ENST00000422141 2135 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 Y_RNA.2-201ENST00000362330 96 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 Y_RNA.70-201ENST00000362886 110 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 SNORD50.1-201ENST00000362987 71 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 U3.9-201ENST00000363823 204 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 RNU4-9P-201ENST00000364951 139 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 Y_RNA.387-201ENST00000383918 102 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 Y_RNA.490-201ENST00000384413 102 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 MIR208B-201ENST00000401172 77 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 Y_RNA.594-201ENST00000410373 140 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 Y_RNA.597-201ENST00000410463 100 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 MTND4P17-201ENST00000470444 350 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 AC132942.1-201ENST00000486753 483 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.08□□□□□ -1.92
TSPAN6O43657 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.08□□□□□ -1.92
TSPAN6O43657 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.08□□□□□ -1.92
TSPAN6O43657 RNU6-507P-201ENST00000516045 100 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.08□□□□□ -1.92
TSPAN6O43657 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.08□□□□□ -1.92
TSPAN6O43657 AC022080.3-201ENST00000544433 482 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 AL078605.1-201ENST00000603529 500 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 AL132765.2-201ENST00000610812 351 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 AC005520.5-201ENST00000613926 164 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 AC133104.2-201ENST00000615272 193 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 HMGB1P24-202ENST00000615653 685 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 MIR1302-1-201ENST00000637932 143 ntBASIC3.08□□□□□ -1.92
TSPAN6O43657 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TSPAN6O43657 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TSPAN6O43657 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.08□□□□□ -1.92
TSPAN6O43657 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TSPAN6O43657 AC000403.1-201ENST00000613696 3585 ntBASIC3.07□□□□□ -1.92
TSPAN6O43657 ZNF299P-201ENST00000406845 1804 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms