Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC096576.1-201ENST00000489014 359 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 AC104564.1-201ENST00000493028 407 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.25□□□□□ -1.89
PRPF3O43395 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.25□□□□□ -1.89
PRPF3O43395 AC005899.2-201ENST00000584353 90 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PRPF3O43395 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRPF3O43395 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PRPF3O43395 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF3O43395 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.24□□□□□ -1.89
PRPF3O43395 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF3O43395 MIR521-1-201ENST00000384902 87 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 MIR181B1-201ENST00000385240 110 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PRPF3O43395 RNU2-25P-201ENST00000411041 191 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.24□□□□□ -1.89
PRPF3O43395 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.24□□□□□ -1.89
PRPF3O43395 AC008571.1-201ENST00000467232 300 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC003982.1-202ENST00000469928 248 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AL049873.1-201ENST00000480540 376 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 PTP4A1P4-201ENST00000512479 322 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC091826.1-201ENST00000514065 313 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 RNU6-559P-201ENST00000516151 98 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC109329.2-201ENST00000519658 482 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.24□□□□□ -1.89
PRPF3O43395 AC105245.1-201ENST00000581934 244 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC078899.3-201ENST00000599065 212 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC004832.5-201ENST00000608677 401 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC137590.2-201ENST00000619709 240 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.24□□□□□ -1.89
PRPF3O43395 AL359757.2-201ENST00000624309 274 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF3O43395 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF3O43395 AC009541.1-201ENST00000438279 2662 ntBASIC3.24□□□□□ -1.89
PRPF3O43395 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.23□□□□□ -1.89
PRPF3O43395 AC080128.1-201ENST00000474389 1917 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF3O43395 RNU6-212P-201ENST00000362642 104 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 Y_RNA.67-201ENST00000362870 100 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 RNA5SP240-201ENST00000365355 128 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 Y_RNA.509-201ENST00000384506 99 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 SNORA26.3-201ENST00000391119 136 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.23□□□□□ -1.89
PRPF3O43395 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.23□□□□□ -1.89
PRPF3O43395 RPL21P2-201ENST00000440049 481 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 CYP2C59P-201ENST00000457790 269 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 RPL30P12-201ENST00000474666 353 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.23□□□□□ -1.89
PRPF3O43395 AIG1P1-201ENST00000503376 148 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.23□□□□□ -1.89
PRPF3O43395 RNU2-53P-201ENST00000516257 147 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 Y_RNA.708-201ENST00000516950 96 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 HSPE1P4-201ENST00000550617 308 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AC007375.1-201ENST00000554513 578 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 MIR5690-201ENST00000583739 73 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AL356280.1-201ENST00000603614 379 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AC018462.2-201ENST00000605375 395 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AC133104.2-201ENST00000615272 193 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 AC098657.3-201ENST00000620434 263 ntBASIC3.23□□□□□ -1.89
PRPF3O43395 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF3O43395 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.23□□□□□ -1.89
PRPF3O43395 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF3O43395 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF3O43395 MIR26A1-201ENST00000362205 77 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 Y_RNA.58-201ENST00000362807 102 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 Y_RNA.154-201ENST00000363624 102 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 RNU6-461P-201ENST00000364195 107 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 RNY3P1-201ENST00000365085 102 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 RNY3-201ENST00000365484 102 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 Y_RNA.490-201ENST00000384413 102 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 RNU6-1297P-201ENST00000384415 104 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PRPF3O43395 AL133475.1-201ENST00000404414 305 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 RNU6-370P-201ENST00000411008 104 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 AC107083.1-201ENST00000439643 279 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF3O43395 RN7SL499P-201ENST00000481141 276 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 AC023141.11-201ENST00000508864 202 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 FRG2DP-202ENST00000566967 323 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 MIR3199-1-201ENST00000582434 88 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 ZNF861P-201ENST00000588126 639 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 7SK.7-201ENST00000603504 247 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 AL670379.2-201ENST00000604983 252 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 AL359314.1-201ENST00000616913 261 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 PISRT1.1-201ENST00000616930 107 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 AC008121.3-201ENST00000618726 433 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 MIR5739-201ENST00000619803 80 ntBASIC3.22□□□□□ -1.89
PRPF3O43395 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PRPF3O43395 RNU4-79P-201ENST00000362764 141 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF3O43395 MIR29B2-201ENST00000385055 81 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 NUP35P1-201ENST00000422734 947 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF3O43395 MTND3P9-201ENST00000429526 346 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF3O43395 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AC236972.2-201ENST00000434979 310 ntBASIC3.21□□□□□ -1.9
PRPF3O43395 AL031659.1-201ENST00000447075 539 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms