Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 IMMP1LP2-201ENST00000552954 492 ntBASIC2.72□□□□□ -1.97
HOXC11O43248 TRAV32-201ENST00000553993 340 ntBASIC2.72□□□□□ -1.97
HOXC11O43248 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC11O43248 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC11O43248 MIR4435-1-201ENST00000582552 80 ntBASIC2.72□□□□□ -1.97
HOXC11O43248 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.71□□□□□ -1.97
HOXC11O43248 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC11O43248 snoU2_19.1-201ENST00000362361 80 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 RNU6-1285P-201ENST00000363480 105 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 Y_RNA.248-201ENST00000364501 109 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 SNORA67.1-201ENST00000364749 141 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 MIR524-201ENST00000385242 87 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 AL513185.2-201ENST00000425543 193 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 AC078809.1-201ENST00000427601 140 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 MTND4LP16-201ENST00000440828 295 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC11O43248 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC11O43248 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC11O43248 RPL39P5-202ENST00000512505 151 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 AC025465.4-201ENST00000513422 638 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 RNA5SP148-201ENST00000516527 94 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 RN7SKP256-201ENST00000517201 314 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 AP005902.1-201ENST00000521358 186 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 CBX3P7-201ENST00000532876 502 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 SCOCP1-201ENST00000554676 349 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 MIR3136-201ENST00000583498 78 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 BNIP3P10-201ENST00000605360 577 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 U4atac.1-201ENST00000618345 95 ntBASIC2.71□□□□□ -1.98
HOXC11O43248 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC11O43248 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXC11O43248 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC11O43248 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HOXC11O43248 AC092268.1-201ENST00000342691 405 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 RNU6-227P-201ENST00000362865 103 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 Y_RNA.86-201ENST00000363020 111 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 RNU6-1317P-201ENST00000364582 104 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC11O43248 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 MIR561-201ENST00000385216 97 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 RN7SKP61-201ENST00000410642 295 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 AL590135.1-201ENST00000422215 156 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC11O43248 AC019205.3-201ENST00000424573 156 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 MTCO3P18-201ENST00000440206 761 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 AC016700.2-201ENST00000446011 156 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC11O43248 AL031659.1-201ENST00000447075 539 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 RNU7-66P-201ENST00000459469 62 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC11O43248 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC11O43248 AC015911.1-201ENST00000495111 156 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 RNU5F-2P-201ENST00000516066 82 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC11O43248 MIR4446-201ENST00000578505 67 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 AC013412.1-201ENST00000610687 192 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 SNORD98-201ENST00000636377 67 ntBASIC2.7□□□□□ -1.98
HOXC11O43248 RNU6-562P-201ENST00000362731 107 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 SNORD32A-201ENST00000364805 84 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 SNORA67.4-201ENST00000384688 142 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 MIR95-201ENST00000385072 81 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 RN7SKP158-201ENST00000410453 326 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 AL030996.1-201ENST00000411430 235 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 MTND3P9-201ENST00000429526 346 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 AL645568.3-201ENST00000433683 316 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 AL139109.1-201ENST00000455491 297 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 HMGB1P35-201ENST00000503360 598 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 RNU6-358P-201ENST00000516564 75 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 SNORA48.11-201ENST00000517015 89 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC11O43248 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC11O43248 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 AC018638.8-201ENST00000588755 281 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 AC060780.3-201ENST00000589464 80 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 AC009541.1-201ENST00000438279 2662 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC11O43248 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC11O43248 Z82209.1-201ENST00000422141 2135 ntBASIC2.69□□□□□ -1.98
HOXC11O43248 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
HOXC11O43248 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC11O43248 SNORD62.1-201ENST00000362541 86 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 XGY1-201ENST00000381172 446 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 RNU6-142P-201ENST00000384019 107 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 Y_RNA.504-201ENST00000384481 104 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 RNU6-510P-201ENST00000391239 108 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 RNU6-325P-201ENST00000411132 105 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 HMGB3P2-201ENST00000411913 584 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC11O43248 RPL23AP95-201ENST00000426806 265 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 AL133396.1-201ENST00000432048 687 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 AC009238.1-201ENST00000442165 424 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 RPL32P28-201ENST00000443577 397 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 AC009237.6-201ENST00000446969 424 ntBASIC2.68□□□□□ -1.98
HOXC11O43248 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms