Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RN7SL812P-201ENST00000493791 279 ntBASIC3.57□□□□□ -1.84
SHOXO15266 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOXO15266 SNORA27.4-201ENST00000516650 95 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.777-201ENST00000516982 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOXO15266 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOXO15266 KLKP1-201ENST00000595979 403 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.771-201ENST00000598668 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 AL391813.1-201ENST00000603098 260 ntBASIC3.57□□□□□ -1.84
SHOXO15266 MZT1P2-201ENST00000604387 248 ntBASIC3.57□□□□□ -1.84
SHOXO15266 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOXO15266 MIR378J-201ENST00000611988 109 ntBASIC3.57□□□□□ -1.84
SHOXO15266 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.789-201ENST00000622480 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 AC091953.3-201ENST00000623220 236 ntBASIC3.57□□□□□ -1.84
SHOXO15266 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.57□□□□□ -1.84
SHOXO15266 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHOXO15266 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOXO15266 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOXO15266 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOXO15266 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOXO15266 Y_RNA.122-201ENST00000363331 96 ntBASIC3.56□□□□□ -1.84
SHOXO15266 RNU6-1020P-201ENST00000363684 107 ntBASIC3.56□□□□□ -1.84
SHOXO15266 SNORD113.2-201ENST00000364166 89 ntBASIC3.56□□□□□ -1.84
SHOXO15266 RNY4P28-201ENST00000365281 93 ntBASIC3.56□□□□□ -1.84
SHOXO15266 Y_RNA.446-201ENST00000384178 104 ntBASIC3.56□□□□□ -1.84
SHOXO15266 RPL23AP1-201ENST00000428990 471 ntBASIC3.56□□□□□ -1.84
SHOXO15266 MRPS10P1-201ENST00000448483 130 ntBASIC3.56□□□□□ -1.84
SHOXO15266 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.56□□□□□ -1.84
SHOXO15266 RN7SL354P-201ENST00000469282 294 ntBASIC3.56□□□□□ -1.84
SHOXO15266 SNORA31.1-201ENST00000515993 133 ntBASIC3.56□□□□□ -1.84
SHOXO15266 SNORA31.5-201ENST00000516190 133 ntBASIC3.56□□□□□ -1.84
SHOXO15266 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.56□□□□□ -1.84
SHOXO15266 MIR4282-201ENST00000583613 67 ntBASIC3.56□□□□□ -1.84
SHOXO15266 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.56□□□□□ -1.84
SHOXO15266 AC069200.1-201ENST00000609511 323 ntBASIC3.56□□□□□ -1.84
SHOXO15266 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.56□□□□□ -1.84
SHOXO15266 MIR7641-1-201ENST00000627518 61 ntBASIC3.56□□□□□ -1.84
SHOXO15266 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SHOXO15266 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOXO15266 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.56□□□□□ -1.84
SHOXO15266 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOXO15266 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
SHOXO15266 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHOXO15266 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SHOXO15266 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
SHOXO15266 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHOXO15266 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHOXO15266 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.55□□□□□ -1.84
SHOXO15266 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
SHOXO15266 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.55□□□□□ -1.84
SHOXO15266 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHOXO15266 Y_RNA.464-201ENST00000384282 110 ntBASIC3.55□□□□□ -1.84
SHOXO15266 MIR659-201ENST00000384963 97 ntBASIC3.55□□□□□ -1.84
SHOXO15266 RNU6-1248P-201ENST00000391096 64 ntBASIC3.55□□□□□ -1.84
SHOXO15266 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SHOXO15266 MIR1911-201ENST00000410783 80 ntBASIC3.55□□□□□ -1.84
SHOXO15266 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.55□□□□□ -1.84
SHOXO15266 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.55□□□□□ -1.84
SHOXO15266 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.55□□□□□ -1.84
SHOXO15266 Y_RNA.638-201ENST00000459374 113 ntBASIC3.55□□□□□ -1.84
SHOXO15266 AL121594.1-201ENST00000475906 575 ntBASIC3.55□□□□□ -1.84
SHOXO15266 RPL31P61-201ENST00000496160 376 ntBASIC3.55□□□□□ -1.84
SHOXO15266 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.55□□□□□ -1.84
SHOXO15266 AC093331.1-201ENST00000521474 169 ntBASIC3.55□□□□□ -1.84
SHOXO15266 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.55□□□□□ -1.84
SHOXO15266 uc_338.14-201ENST00000613162 166 ntBASIC3.55□□□□□ -1.84
SHOXO15266 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHOXO15266 AC092593.1-201ENST00000515413 1815 ntBASIC3.55□□□□□ -1.84
SHOXO15266 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHOXO15266 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SHOXO15266 AC026241.1-201ENST00000517873 2142 ntBASIC3.55□□□□□ -1.84
SHOXO15266 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
SHOXO15266 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHOXO15266 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOXO15266 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOXO15266 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SHOXO15266 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOXO15266 RNU6-545P-201ENST00000362681 104 ntBASIC3.54□□□□□ -1.84
SHOXO15266 RNU6-655P-201ENST00000362858 107 ntBASIC3.54□□□□□ -1.84
SHOXO15266 RNU1-105P-201ENST00000363470 161 ntBASIC3.54□□□□□ -1.84
SHOXO15266 RNU6-1210P-201ENST00000363775 107 ntBASIC3.54□□□□□ -1.84
SHOXO15266 U3.9-201ENST00000363823 204 ntBASIC3.54□□□□□ -1.84
SHOXO15266 RNA5SP201-201ENST00000410316 124 ntBASIC3.54□□□□□ -1.84
SHOXO15266 RNA5SP475-201ENST00000410568 110 ntBASIC3.54□□□□□ -1.84
SHOXO15266 AC002075.2-201ENST00000425207 252 ntBASIC3.54□□□□□ -1.84
SHOXO15266 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.54□□□□□ -1.84
SHOXO15266 AC011276.1-201ENST00000469688 323 ntBASIC3.54□□□□□ -1.84
SHOXO15266 UQCRHP4-201ENST00000471686 272 ntBASIC3.54□□□□□ -1.84
SHOXO15266 AC103975.1-201ENST00000482506 483 ntBASIC3.54□□□□□ -1.84
SHOXO15266 AC105137.1-201ENST00000484355 562 ntBASIC3.54□□□□□ -1.84
SHOXO15266 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
SHOXO15266 EIF4A1P12-201ENST00000551910 141 ntBASIC3.54□□□□□ -1.84
SHOXO15266 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.54□□□□□ -1.84
SHOXO15266 PARP1P2-201ENST00000556806 195 ntBASIC3.54□□□□□ -1.84
SHOXO15266 MIR4284-201ENST00000578924 81 ntBASIC3.54□□□□□ -1.84
SHOXO15266 RN7SL690P-201ENST00000582087 240 ntBASIC3.54□□□□□ -1.84
SHOXO15266 FAM27D1-201ENST00000612308 341 ntBASIC3.54□□□□□ -1.84
SHOXO15266 AC073349.3-201ENST00000617616 186 ntBASIC3.54□□□□□ -1.84
SHOXO15266 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms