Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.05□□□□□ -2.4
CHD1O14646 RNU6-390P-201ENST00000516259 103 ntBASIC0.05□□□□□ -2.4
CHD1O14646 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.05□□□□□ -2.4
CHD1O14646 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.05□□□□□ -2.4
CHD1O14646 LARP7P2-201ENST00000575306 125 ntBASIC0.05□□□□□ -2.4
CHD1O14646 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.05□□□□□ -2.4
CHD1O14646 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.05□□□□□ -2.4
CHD1O14646 RNU6-619P-201ENST00000365146 108 ntBASIC0.04□□□□□ -2.4
CHD1O14646 Y_RNA.610-201ENST00000410681 103 ntBASIC0.04□□□□□ -2.4
CHD1O14646 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.04□□□□□ -2.4
CHD1O14646 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.04□□□□□ -2.4
CHD1O14646 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.04□□□□□ -2.4
CHD1O14646 AL929288.2-201ENST00000446368 407 ntBASIC0.04□□□□□ -2.4
CHD1O14646 OR6C5P-201ENST00000452388 923 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC023194.1-201ENST00000493084 308 ntBASIC0.04□□□□□ -2.4
CHD1O14646 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.04□□□□□ -2.4
CHD1O14646 AC112206.3-201ENST00000514578 389 ntBASIC0.04□□□□□ -2.4
CHD1O14646 IGJP1-201ENST00000522682 475 ntBASIC0.04□□□□□ -2.4
CHD1O14646 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.04□□□□□ -2.4
CHD1O14646 AC015688.6-201ENST00000577737 104 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC090330.1-201ENST00000588646 764 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC096586.1-201ENST00000610267 561 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC009268.2-201ENST00000621925 457 ntBASIC0.04□□□□□ -2.4
CHD1O14646 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.04□□□□□ -2.4
CHD1O14646 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
CHD1O14646 RNU6-1167P-201ENST00000363227 94 ntBASIC0.04□□□□□ -2.4
CHD1O14646 U3.9-201ENST00000363823 204 ntBASIC0.04□□□□□ -2.4
CHD1O14646 RNA5SP111-201ENST00000411386 101 ntBASIC0.04□□□□□ -2.4
CHD1O14646 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.04□□□□□ -2.4
CHD1O14646 TXNL1P1-201ENST00000429528 554 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.04□□□□□ -2.4
CHD1O14646 snoU13.27-201ENST00000459278 104 ntBASIC0.04□□□□□ -2.4
CHD1O14646 RPL37P6-201ENST00000460682 294 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC011005.2-201ENST00000487324 359 ntBASIC0.04□□□□□ -2.4
CHD1O14646 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.04□□□□□ -2.4
CHD1O14646 RNU6-165P-201ENST00000517170 99 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.04□□□□□ -2.4
CHD1O14646 MIR548AX-201ENST00000580117 73 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AP001981.2-201ENST00000603241 418 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC105148.1-201ENST00000604961 409 ntBASIC0.04□□□□□ -2.4
CHD1O14646 AC092106.3-201ENST00000611308 722 ntBASIC0.04□□□□□ -2.4
CHD1O14646 MIR29B2-201ENST00000385055 81 ntBASIC0.03□□□□□ -2.4
CHD1O14646 RNU1-119P-201ENST00000391122 165 ntBASIC0.03□□□□□ -2.4
CHD1O14646 RNU2-28P-201ENST00000410457 189 ntBASIC0.03□□□□□ -2.4
CHD1O14646 AC019178.2-201ENST00000423595 505 ntBASIC0.03□□□□□ -2.4
CHD1O14646 RPS27AP8-201ENST00000452665 445 ntBASIC0.03□□□□□ -2.4
CHD1O14646 AC233266.1-201ENST00000454518 96 ntBASIC0.03□□□□□ -2.4
CHD1O14646 BTF3P15-201ENST00000455606 336 ntBASIC0.03□□□□□ -2.4
CHD1O14646 AL162395.1-201ENST00000457882 422 ntBASIC0.03□□□□□ -2.4
CHD1O14646 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.03□□□□□ -2.4
CHD1O14646 SUMO2P16-201ENST00000519475 264 ntBASIC0.03□□□□□ -2.4
CHD1O14646 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.03□□□□□ -2.4
CHD1O14646 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.03□□□□□ -2.4
CHD1O14646 AC107304.1-201ENST00000604229 296 ntBASIC0.03□□□□□ -2.4
CHD1O14646 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.03□□□□□ -2.4
CHD1O14646 AC242852.1-201ENST00000612151 96 ntBASIC0.03□□□□□ -2.4
CHD1O14646 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.03□□□□□ -2.4
CHD1O14646 AC244015.1-201ENST00000622301 99 ntBASIC0.03□□□□□ -2.4
CHD1O14646 U6.99-201ENST00000637524 83 ntBASIC0.03□□□□□ -2.4
CHD1O14646 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.41
CHD1O14646 Y_RNA.124-201ENST00000363339 93 ntBASIC0.02□□□□□ -2.41
CHD1O14646 RNU6-898P-201ENST00000365627 104 ntBASIC0.02□□□□□ -2.41
CHD1O14646 SNORD116-23-201ENST00000384645 92 ntBASIC0.02□□□□□ -2.41
CHD1O14646 DHFRP6-201ENST00000401776 268 ntBASIC0.02□□□□□ -2.41
CHD1O14646 CBX3P9-201ENST00000402326 552 ntBASIC0.02□□□□□ -2.41
CHD1O14646 Y_RNA.597-201ENST00000410463 100 ntBASIC0.02□□□□□ -2.41
CHD1O14646 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.02□□□□□ -2.41
CHD1O14646 ISCA1P1-201ENST00000426679 387 ntBASIC0.02□□□□□ -2.41
CHD1O14646 RAB28P5-201ENST00000427490 651 ntBASIC0.02□□□□□ -2.41
CHD1O14646 FABP5P4-201ENST00000437203 171 ntBASIC0.02□□□□□ -2.41
CHD1O14646 RNU1-131P-201ENST00000458943 161 ntBASIC0.02□□□□□ -2.41
CHD1O14646 snoU13.11-201ENST00000459219 104 ntBASIC0.02□□□□□ -2.41
CHD1O14646 AC097473.1-201ENST00000508142 408 ntBASIC0.02□□□□□ -2.41
CHD1O14646 RNA5SP67-201ENST00000516422 131 ntBASIC0.02□□□□□ -2.41
CHD1O14646 AL590240.4-201ENST00000616908 390 ntBASIC0.02□□□□□ -2.41
CHD1O14646 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
CHD1O14646 SNORD118-201ENST00000363593 134 ntBASIC0.01□□□□□ -2.41
CHD1O14646 MIR214-201ENST00000385214 110 ntBASIC0.01□□□□□ -2.41
CHD1O14646 BTF3L4P3-201ENST00000418879 476 ntBASIC0.01□□□□□ -2.41
CHD1O14646 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD1O14646 VN1R10P-201ENST00000447106 875 ntBASIC0.01□□□□□ -2.41
CHD1O14646 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.01□□□□□ -2.41
CHD1O14646 AC024589.1-201ENST00000512207 263 ntBASIC0.01□□□□□ -2.41
CHD1O14646 SNORA31.2-201ENST00000516019 134 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC090615.1-201ENST00000577519 154 ntBASIC0.01□□□□□ -2.41
CHD1O14646 MIR1248-201ENST00000629190 106 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC068647.2-201ENST00000637380 353 ntBASIC0.01□□□□□ -2.41
CHD1O14646 RNU6-945P-201ENST00000383947 107 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AL357139.1-201ENST00000407792 426 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC245047.7-201ENST00000440265 293 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC104982.1-201ENST00000478775 574 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD1O14646 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD1O14646 SCARNA16.5-201ENST00000517114 183 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC141557.1-201ENST00000540982 400 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC093027.1-201ENST00000546698 429 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC126365.2-201ENST00000580630 379 ntBASIC0.01□□□□□ -2.41
CHD1O14646 MIR4645-201ENST00000583158 77 ntBASIC0.01□□□□□ -2.41
CHD1O14646 Z98751.3-201ENST00000604447 521 ntBASIC0.01□□□□□ -2.41
CHD1O14646 AC097372.5-201ENST00000623665 376 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms