Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC079448.1-201ENST00000449377 373 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 AC010587.1-201ENST00000505809 469 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.01□□□□□ -2.25
UBFD1O14562 FABP5P5-201ENST00000515537 406 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.01□□□□□ -2.25
UBFD1O14562 MTND2P7-201ENST00000521337 640 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.01□□□□□ -2.25
UBFD1O14562 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.01□□□□□ -2.25
UBFD1O14562 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.01□□□□□ -2.25
UBFD1O14562 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
UBFD1O14562 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.01□□□□□ -2.25
UBFD1O14562 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.01□□□□□ -2.25
UBFD1O14562 AC137800.2-201ENST00000574375 120 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 AC008521.1-201ENST00000587471 187 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 AC105129.3-201ENST00000605455 485 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 AC068205.3-201ENST00000636385 468 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
UBFD1O14562 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
UBFD1O14562 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
UBFD1O14562 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
UBFD1O14562 CBX3P1-201ENST00000325243 554 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC073343.1-201ENST00000328239 651 ntBASIC1□□□□□ -2.25
UBFD1O14562 Y_RNA.67-201ENST00000362870 100 ntBASIC1□□□□□ -2.25
UBFD1O14562 RNU6-78P-201ENST00000362897 107 ntBASIC1□□□□□ -2.25
UBFD1O14562 RNU6-271P-201ENST00000363858 105 ntBASIC1□□□□□ -2.25
UBFD1O14562 RNU6-533P-201ENST00000384144 107 ntBASIC1□□□□□ -2.25
UBFD1O14562 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1□□□□□ -2.25
UBFD1O14562 RPS27AP14-201ENST00000422868 454 ntBASIC1□□□□□ -2.25
UBFD1O14562 CBX3P6-201ENST00000430257 527 ntBASIC1□□□□□ -2.25
UBFD1O14562 MTND4LP16-201ENST00000440828 295 ntBASIC1□□□□□ -2.25
UBFD1O14562 MTND5P2-201ENST00000442927 1142 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC130509.1-201ENST00000464158 433 ntBASIC1□□□□□ -2.25
UBFD1O14562 UBE2V1P12-201ENST00000503954 474 ntBASIC1□□□□□ -2.25
UBFD1O14562 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1□□□□□ -2.25
UBFD1O14562 RNU5F-2P-201ENST00000516066 82 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1□□□□□ -2.25
UBFD1O14562 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1□□□□□ -2.25
UBFD1O14562 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1□□□□□ -2.25
UBFD1O14562 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1□□□□□ -2.25
UBFD1O14562 AP003034.1-201ENST00000534621 422 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1□□□□□ -2.25
UBFD1O14562 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1□□□□□ -2.25
UBFD1O14562 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1□□□□□ -2.25
UBFD1O14562 MIR4999-201ENST00000585029 91 ntBASIC1□□□□□ -2.25
UBFD1O14562 AL031281.1-201ENST00000604049 488 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC018714.1-201ENST00000605028 208 ntBASIC1□□□□□ -2.25
UBFD1O14562 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1□□□□□ -2.25
UBFD1O14562 AC083806.3-201ENST00000614016 455 ntBASIC1□□□□□ -2.25
UBFD1O14562 MIR8074-201ENST00000615081 81 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC022709.1-201ENST00000615967 87 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC092140.2-201ENST00000618027 521 ntBASIC1□□□□□ -2.25
UBFD1O14562 AC026585.1-201ENST00000619582 524 ntBASIC1□□□□□ -2.25
UBFD1O14562 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1□□□□□ -2.25
UBFD1O14562 AL157786.1-207ENST00000627771 695 ntBASIC1□□□□□ -2.25
UBFD1O14562 RNU1-93P-201ENST00000364704 169 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 MIR544A-201ENST00000384855 91 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.99□□□□□ -2.25
UBFD1O14562 SNRPEP10-201ENST00000420249 274 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
UBFD1O14562 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
UBFD1O14562 DUXAP8-207ENST00000456786 622 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 MTND3P25-201ENST00000509243 135 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.99□□□□□ -2.25
UBFD1O14562 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.99□□□□□ -2.25
UBFD1O14562 AC091489.2-201ENST00000566263 604 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AC109446.2-201ENST00000567872 497 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 SNORA77B-201ENST00000578179 125 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AC091135.1-201ENST00000585943 307 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AC073539.2-201ENST00000597113 165 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AC022022.2-201ENST00000602989 360 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AL136363.2-201ENST00000604173 851 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 MIR6788-201ENST00000618842 66 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 AC130454.1-201ENST00000622948 401 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.99□□□□□ -2.25
UBFD1O14562 AC008993.2-201ENST00000631744 806 ntBASIC0.99□□□□□ -2.25
UBFD1O14562 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
UBFD1O14562 MIR340-201ENST00000362125 95 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 Y_RNA.18-201ENST00000362461 102 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 Y_RNA.22-201ENST00000362492 102 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 RNU4-15P-201ENST00000362613 141 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 RNU6-112P-201ENST00000363599 104 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 RNU6-1080P-201ENST00000383982 107 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 SNORD115.1-201ENST00000391109 76 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
UBFD1O14562 AL589872.1-201ENST00000426602 288 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 AL354941.1-201ENST00000438600 464 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 CR769776.1-201ENST00000441254 787 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.98□□□□□ -2.25
UBFD1O14562 ART2BP-201ENST00000453501 499 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.98□□□□□ -2.25
UBFD1O14562 AL049829.1-201ENST00000465411 156 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 RPS23P4-201ENST00000487908 423 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.98□□□□□ -2.25
UBFD1O14562 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.98□□□□□ -2.25
UBFD1O14562 AC104806.1-201ENST00000508720 308 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 RNU6-1220P-201ENST00000517126 108 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms