Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM38O00635 AL021879.1-201ENST00000611756 288 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM38O00635 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM38O00635 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM38O00635 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM38O00635 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.21□□□□□ -1.89
TRIM38O00635 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM38O00635 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 U3.6-201ENST00000363622 211 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 Y_RNA.288-201ENST00000364854 92 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM38O00635 Y_RNA.428-201ENST00000384078 102 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RNU6-748P-201ENST00000384648 107 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 SNORA19-201ENST00000384737 128 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RPL21P3-201ENST00000395517 478 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RPL21P1-201ENST00000399532 476 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RNU6-101P-201ENST00000410323 104 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM38O00635 AL096701.2-201ENST00000416920 238 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 PGBD4P6-201ENST00000421501 610 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 MRPS18CP6-201ENST00000423587 223 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RPS15AP10-201ENST00000432472 382 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AL353752.1-201ENST00000454946 260 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC112492.4-201ENST00000456549 352 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RNU6-1132P-201ENST00000459214 107 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RNU7-138P-201ENST00000459479 64 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC146507.2-201ENST00000460608 476 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM38O00635 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM38O00635 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RNU6-1069P-201ENST00000516612 133 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 MIR3128-201ENST00000581957 66 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 MIR4298-201ENST00000584380 73 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC125232.2-201ENST00000592457 143 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC078899.3-201ENST00000599065 212 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 RPL23AP78-201ENST00000599928 470 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM38O00635 AL355297.3-201ENST00000604082 446 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC091152.3-201ENST00000604227 325 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 ATP5A1P2-202ENST00000616464 443 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 AC141273.2-201ENST00000618989 130 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM38O00635 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM38O00635 AL365361.1-201ENST00000566942 3481 ntBASIC3.21□□□□□ -1.9
TRIM38O00635 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TRIM38O00635 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
TRIM38O00635 Y_RNA.222-201ENST00000364264 102 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 Y_RNA.350-201ENST00000365409 98 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 Y_RNA.461-201ENST00000384263 103 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 Y_RNA.483-201ENST00000384380 101 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 Y_RNA.510-201ENST00000384511 114 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 MIR548M-201ENST00000408260 86 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 COTL1P1-201ENST00000422309 375 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 AC009414.1-201ENST00000427200 443 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 OSTCP8-201ENST00000445117 448 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM38O00635 SNORD127-201ENST00000458892 86 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 AC091179.1-201ENST00000461606 579 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 RN7SL863P-201ENST00000462370 296 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 AC117503.1-201ENST00000472241 394 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM38O00635 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM38O00635 RPL23AP94-201ENST00000512518 302 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM38O00635 AC109479.2-201ENST00000517842 174 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM38O00635 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM38O00635 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM38O00635 AC008121.1-201ENST00000603244 268 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 AC002064.3-201ENST00000623448 346 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM38O00635 AC010615.1-201ENST00000594254 1764 ntBASIC3.2□□□□□ -1.9
TRIM38O00635 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM38O00635 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM38O00635 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM38O00635 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM38O00635 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM38O00635 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM38O00635 HAUS6P2-201ENST00000433254 2404 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 Y_RNA.26-201ENST00000362539 101 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 Y_RNA.117-201ENST00000363294 101 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 SNORA80A-201ENST00000363922 136 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 RNU6-306P-201ENST00000384617 107 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 RNU6-19P-201ENST00000384718 107 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 RNU2-23P-201ENST00000410545 195 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 RNU2-38P-201ENST00000410856 79 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM38O00635 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM38O00635 USP9YP30-201ENST00000430729 455 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 CST9LP2-201ENST00000437612 320 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 AC009969.1-201ENST00000438726 172 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM38O00635 AC087884.1-201ENST00000469738 328 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 GZMAP1-201ENST00000503054 631 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 AC114801.2-201ENST00000503825 781 ntBASIC3.19□□□□□ -1.9
TRIM38O00635 SEM1P1-201ENST00000506694 209 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms