Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SOX1O00570 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 AC073073.2-201ENST00000609827 2578 ntBASIC4.12□□□□□ -1.75
SOX1O00570 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SOX1O00570 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SOX1O00570 RNU4-56P-201ENST00000364700 142 ntBASIC4.12□□□□□ -1.75
SOX1O00570 RNU6-1280P-201ENST00000365211 107 ntBASIC4.12□□□□□ -1.75
SOX1O00570 SNORA36A-201ENST00000384221 132 ntBASIC4.12□□□□□ -1.75
SOX1O00570 SNORA48.8-201ENST00000391324 134 ntBASIC4.12□□□□□ -1.75
SOX1O00570 MIR921-201ENST00000401133 56 ntBASIC4.12□□□□□ -1.75
SOX1O00570 RPS26P42-201ENST00000413485 326 ntBASIC4.12□□□□□ -1.75
SOX1O00570 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX1O00570 CKS1BP7-201ENST00000522230 235 ntBASIC4.12□□□□□ -1.75
SOX1O00570 NACAP3-201ENST00000552100 481 ntBASIC4.12□□□□□ -1.75
SOX1O00570 AL359198.2-201ENST00000611836 194 ntBASIC4.12□□□□□ -1.75
SOX1O00570 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX1O00570 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SOX1O00570 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SOX1O00570 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SOX1O00570 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
SOX1O00570 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SOX1O00570 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SOX1O00570 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SOX1O00570 RNU6-653P-201ENST00000363074 106 ntBASIC4.11□□□□□ -1.75
SOX1O00570 Y_RNA.272-201ENST00000364696 102 ntBASIC4.11□□□□□ -1.75
SOX1O00570 Y_RNA.343-201ENST00000365354 112 ntBASIC4.11□□□□□ -1.75
SOX1O00570 RNU6-211P-201ENST00000384047 107 ntBASIC4.11□□□□□ -1.75
SOX1O00570 AL357139.1-201ENST00000407792 426 ntBASIC4.11□□□□□ -1.75
SOX1O00570 AC138623.1-201ENST00000418060 216 ntBASIC4.11□□□□□ -1.75
SOX1O00570 AC012306.1-201ENST00000423267 114 ntBASIC4.11□□□□□ -1.75
SOX1O00570 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX1O00570 AC025750.2-201ENST00000442609 450 ntBASIC4.11□□□□□ -1.75
SOX1O00570 RN7SL504P-201ENST00000494496 287 ntBASIC4.11□□□□□ -1.75
SOX1O00570 RNU6-191P-201ENST00000516295 94 ntBASIC4.11□□□□□ -1.75
SOX1O00570 AC018448.1-201ENST00000552843 316 ntBASIC4.11□□□□□ -1.75
SOX1O00570 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX1O00570 AL133393.1-201ENST00000603277 287 ntBASIC4.11□□□□□ -1.75
SOX1O00570 BMS1P21-201ENST00000634565 365 ntBASIC4.11□□□□□ -1.75
SOX1O00570 AC092593.1-201ENST00000515413 1815 ntBASIC4.11□□□□□ -1.75
SOX1O00570 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SOX1O00570 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.11□□□□□ -1.75
SOX1O00570 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.1□□□□□ -1.75
SOX1O00570 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.1□□□□□ -1.75
SOX1O00570 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.1□□□□□ -1.75
SOX1O00570 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SOX1O00570 MTND5P35-201ENST00000557537 1720 ntBASIC4.1□□□□□ -1.75
SOX1O00570 NOL8P1-201ENST00000508336 3529 ntBASIC4.1□□□□□ -1.75
SOX1O00570 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SOX1O00570 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 Y_RNA.179-201ENST00000363844 90 ntBASIC4.1□□□□□ -1.75
SOX1O00570 Y_RNA.498-201ENST00000384460 102 ntBASIC4.1□□□□□ -1.75
SOX1O00570 MIR1261-201ENST00000408659 82 ntBASIC4.1□□□□□ -1.75
SOX1O00570 RNA5SP293-201ENST00000410527 113 ntBASIC4.1□□□□□ -1.75
SOX1O00570 RNU2-51P-201ENST00000410708 197 ntBASIC4.1□□□□□ -1.75
SOX1O00570 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.1□□□□□ -1.75
SOX1O00570 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.1□□□□□ -1.75
SOX1O00570 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.1□□□□□ -1.75
SOX1O00570 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.1□□□□□ -1.75
SOX1O00570 AC012308.1-201ENST00000451232 178 ntBASIC4.1□□□□□ -1.75
SOX1O00570 AP000705.1-201ENST00000454567 350 ntBASIC4.1□□□□□ -1.75
SOX1O00570 SNORD105B-201ENST00000458770 79 ntBASIC4.1□□□□□ -1.75
SOX1O00570 snoU13.6-201ENST00000458785 104 ntBASIC4.1□□□□□ -1.75
SOX1O00570 RNU6-625P-201ENST00000459412 107 ntBASIC4.1□□□□□ -1.75
SOX1O00570 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
SOX1O00570 AC108022.1-201ENST00000493466 478 ntBASIC4.1□□□□□ -1.75
SOX1O00570 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.1□□□□□ -1.75
SOX1O00570 RNU6-62P-201ENST00000516526 102 ntBASIC4.1□□□□□ -1.75
SOX1O00570 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.1□□□□□ -1.75
SOX1O00570 AC055872.1-201ENST00000570978 278 ntBASIC4.1□□□□□ -1.75
SOX1O00570 AC009163.5-201ENST00000575421 637 ntBASIC4.1□□□□□ -1.75
SOX1O00570 MIR3529-201ENST00000637713 78 ntBASIC4.1□□□□□ -1.75
SOX1O00570 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.1□□□□□ -1.75
SOX1O00570 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SOX1O00570 FAM35BP-202ENST00000497389 3337 ntBASIC4.1□□□□□ -1.75
SOX1O00570 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SOX1O00570 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SOX1O00570 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.09□□□□□ -1.75
SOX1O00570 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SOX1O00570 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SOX1O00570 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SOX1O00570 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOX1O00570 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SOX1O00570 RNU6-1310P-201ENST00000384153 107 ntBASIC4.09□□□□□ -1.75
SOX1O00570 Y_RNA.571-201ENST00000384753 98 ntBASIC4.09□□□□□ -1.75
SOX1O00570 MIR195-201ENST00000385194 87 ntBASIC4.09□□□□□ -1.75
SOX1O00570 RNU6-1248P-201ENST00000391096 64 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms