Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
HMGN4O00479 MTND4P21-201ENST00000453886 1357 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 SNORA63.3-201ENST00000362682 132 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 RNU6-45P-201ENST00000384471 107 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 ARL5AP1-201ENST00000418991 388 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 AC073614.1-201ENST00000438690 650 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 AC073910.1-201ENST00000445047 438 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 AL606517.1-201ENST00000446914 387 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 AL162395.1-201ENST00000457882 422 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.02□□□□□ -2.41
HMGN4O00479 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.02□□□□□ -2.41
HMGN4O00479 AC114981.1-201ENST00000503897 678 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.02□□□□□ -2.41
HMGN4O00479 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 AC091163.3-201ENST00000518269 1144 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
HMGN4O00479 AC023538.1-201ENST00000534576 736 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.02□□□□□ -2.41
HMGN4O00479 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 MIR4514-201ENST00000581410 57 ntBASIC-0.02□□□□□ -2.41
HMGN4O00479 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.02□□□□□ -2.41
HMGN4O00479 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.03□□□□□ -2.41
HMGN4O00479 AC107982.1-201ENST00000507171 1300 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 RNU4-67P-201ENST00000364569 141 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 RPL21P24-201ENST00000413752 448 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 DAP3P1-201ENST00000441522 278 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 RNU7-140P-201ENST00000459546 60 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AC092991.1-201ENST00000477176 376 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 RNU4-77P-201ENST00000516692 156 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 SUMO2P16-201ENST00000519475 264 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 CR383656.8-201ENST00000549046 145 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGN4O00479 AC012414.2-201ENST00000559474 187 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AL356157.2-201ENST00000605122 111 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 MIR1264-201ENST00000616374 69 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AC007742.2-201ENST00000618226 398 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 AL445264.1-201ENST00000621719 171 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.03□□□□□ -2.41
HMGN4O00479 CASC19-280ENST00000642102 1351 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 RNU1-96P-201ENST00000364163 162 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 RNU6-343P-201ENST00000364709 104 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 SNORA4.2-201ENST00000365313 147 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 RNU6-166P-201ENST00000384371 107 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 RNU6-342P-201ENST00000384521 104 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 MIR598-201ENST00000384868 97 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 RNA5SP390-201ENST00000410191 113 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AL590556.1-201ENST00000423231 483 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 MTND4P20-201ENST00000424125 869 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AC013262.1-201ENST00000426710 252 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
HMGN4O00479 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.04□□□□□ -2.42
HMGN4O00479 GTF2IP12-201ENST00000456547 356 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 RNU7-21P-201ENST00000459430 62 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.04□□□□□ -2.42
HMGN4O00479 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.04□□□□□ -2.42
HMGN4O00479 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.04□□□□□ -2.42
HMGN4O00479 ZKSCAN7P1-201ENST00000543668 673 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.04□□□□□ -2.42
HMGN4O00479 AL132657.2-201ENST00000564417 358 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AC025627.3-201ENST00000582078 182 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AC068620.3-201ENST00000602749 560 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AC023932.2-201ENST00000603176 175 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 LARP7P1-201ENST00000605576 316 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AC010487.4-201ENST00000637027 61 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 MTND5P16-201ENST00000460269 1703 ntBASIC-0.04□□□□□ -2.42
HMGN4O00479 AL159152.1-201ENST00000635019 2587 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 RNU6-216P-201ENST00000363282 104 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 RNU6-163P-201ENST00000384396 106 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AC016831.2-201ENST00000417179 352 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AL031313.1-201ENST00000448435 256 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.05□□□□□ -2.42
HMGN4O00479 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.05□□□□□ -2.42
HMGN4O00479 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.05□□□□□ -2.42
HMGN4O00479 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.05□□□□□ -2.42
HMGN4O00479 RNU6-143P-201ENST00000516942 93 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AC025678.1-201ENST00000567861 338 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 MIR4431-201ENST00000579990 94 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AL513534.2-201ENST00000603836 250 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AC100812.1-201ENST00000607622 580 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AL159153.1-201ENST00000619688 317 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 AC007792.1-201ENST00000623023 402 ntBASIC-0.05□□□□□ -2.42
HMGN4O00479 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.05□□□□□ -2.42
HMGN4O00479 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
HMGN4O00479 SNORA16.2-201ENST00000390991 127 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 AL359634.1-202ENST00000404721 284 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 MTCO1P21-201ENST00000416634 589 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms