Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TIMM9P3-201ENST00000428659 274 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.98□□□□□ -2.09
PDLIM1O00151 DNAJC19P4-201ENST00000440115 345 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 TPTE2P5-203ENST00000458118 728 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 MTCO3P38-201ENST00000468910 766 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AL121594.1-201ENST00000475906 575 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.98□□□□□ -2.09
PDLIM1O00151 CCDC34P1-201ENST00000507441 517 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AK3P2-201ENST00000507976 429 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 RNU6-1038P-201ENST00000516516 104 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
PDLIM1O00151 AC026464.5-201ENST00000562497 722 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.98□□□□□ -2.09
PDLIM1O00151 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.98□□□□□ -2.09
PDLIM1O00151 MIR4529-201ENST00000578110 78 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AL359880.1-201ENST00000621879 266 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.97□□□□□ -2.09
PDLIM1O00151 RNU6-827P-201ENST00000365553 106 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.97□□□□□ -2.09
PDLIM1O00151 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.97□□□□□ -2.09
PDLIM1O00151 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.97□□□□□ -2.09
PDLIM1O00151 PMCHL2-203ENST00000457791 237 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 RNU1-41P-201ENST00000516161 162 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 RNU1-48P-201ENST00000516400 162 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 RNU6-314P-201ENST00000516574 104 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 CYCSP27-201ENST00000527643 293 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 AC103996.1-201ENST00000555468 102 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.97□□□□□ -2.09
PDLIM1O00151 MIR3945-201ENST00000581853 98 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 MIR4424-201ENST00000585257 86 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 AC009314.1-201ENST00000603871 304 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 AC004492.1-201ENST00000607036 742 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 AC015540.1-201ENST00000615828 501 ntBASIC1.97□□□□□ -2.09
PDLIM1O00151 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
PDLIM1O00151 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
PDLIM1O00151 snoU2_19.1-201ENST00000362361 80 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RNU6-336P-201ENST00000364891 107 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 Y_RNA.318-201ENST00000365131 97 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RNU6-1222P-201ENST00000384615 107 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 MIR95-201ENST00000385072 81 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 CBX3P9-201ENST00000402326 552 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RNA5SP425-201ENST00000410336 112 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RN7SKP223-201ENST00000410582 62 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 AC243964.1-201ENST00000441814 261 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 snoU13.14-201ENST00000459372 104 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RN7SL429P-201ENST00000479090 223 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 AC107032.1-201ENST00000485945 480 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RN7SL489P-201ENST00000486185 223 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RN7SL327P-201ENST00000488659 223 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RPL30P1-201ENST00000488676 339 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PDLIM1O00151 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.96□□□□□ -2.1
PDLIM1O00151 Y_RNA.693-201ENST00000516641 110 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.96□□□□□ -2.1
PDLIM1O00151 IMMP1LP2-201ENST00000552954 492 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.96□□□□□ -2.1
PDLIM1O00151 MIR1273D-201ENST00000577266 86 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 MIR4287-201ENST00000579398 78 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.96□□□□□ -2.1
PDLIM1O00151 AC091135.1-201ENST00000585943 307 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 VN1R80P-201ENST00000597126 338 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 AC013412.1-201ENST00000610687 192 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 AC005296.1-201ENST00000616145 209 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 RN7SL853P-201ENST00000617250 223 ntBASIC1.96□□□□□ -2.1
PDLIM1O00151 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDLIM1O00151 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
PDLIM1O00151 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.96□□□□□ -2.1
PDLIM1O00151 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
PDLIM1O00151 Y_RNA.372-201ENST00000365599 102 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 RNU6-38P-201ENST00000384085 107 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 RNU6-1106P-201ENST00000390845 107 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 AL591034.2-201ENST00000402839 359 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 RN7SKP192-201ENST00000411291 327 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.95□□□□□ -2.1
PDLIM1O00151 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.95□□□□□ -2.1
PDLIM1O00151 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.95□□□□□ -2.1
PDLIM1O00151 RNU6-333P-201ENST00000459117 107 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 AC087884.1-201ENST00000469738 328 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 RPL21P99-201ENST00000480369 423 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.95□□□□□ -2.1
PDLIM1O00151 SNORA14.1-201ENST00000516113 141 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 RNU6-189P-201ENST00000516120 101 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 Y_RNA.704-201ENST00000516851 102 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.95□□□□□ -2.1
PDLIM1O00151 AC090115.3-201ENST00000553218 849 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.95□□□□□ -2.1
PDLIM1O00151 DEFB122-202ENST00000569013 197 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 AC092747.3-201ENST00000603769 301 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 AL159153.1-201ENST00000619688 317 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 AC099654.12-201ENST00000639868 649 ntBASIC1.95□□□□□ -2.1
PDLIM1O00151 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
PDLIM1O00151 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PDLIM1O00151 Y_RNA.41-201ENST00000362646 102 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 RNU1-23P-201ENST00000363361 144 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 SNORA25B-201ENST00000365507 128 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PDLIM1O00151 RNU6-692P-201ENST00000384496 107 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms