Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC010889.1-201ENST00000566193 2666 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.86-201ENST00000363020 111 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.324-201ENST00000365165 102 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.373-201ENST00000365600 103 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 NDUFS5P4-201ENST00000412983 318 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 AL590632.1-201ENST00000424289 371 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 MTATP6P13-201ENST00000438531 667 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 AL161651.1-201ENST00000440882 223 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 AC096638.1-201ENST00000444678 216 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-1208P-201ENST00000459588 107 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 TRBV1-201ENST00000476502 284 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 MTND4P7-201ENST00000523876 130 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 AL133241.1-201ENST00000556832 487 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 MTCO3P23-201ENST00000561363 289 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 MIR5692C1-201ENST00000585309 91 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 Z82243.1-201ENST00000609432 473 ntBASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.88□□□□□ -2.11
TRIM49D1C9J1S8 MTND4P27-201ENST00000450813 1354 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 CENPCP1-201ENST00000533085 2578 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 MIR412-201ENST00000362142 91 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-78P-201ENST00000362897 107 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AL030996.1-201ENST00000411430 235 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AL513185.2-201ENST00000425543 193 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 Z98742.2-201ENST00000431564 187 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 ERLEC1P1-201ENST00000433806 578 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AL513124.1-201ENST00000450410 614 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 FGF7P6-202ENST00000451282 293 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 MTATP6P7-201ENST00000453315 681 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 RNU7-167P-201ENST00000459160 62 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AP001324.2-201ENST00000461163 319 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 RPS27P21-201ENST00000486977 252 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC116655.1-201ENST00000508324 901 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC023141.11-201ENST00000508864 202 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC074344.1-201ENST00000512823 224 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 RNU5F-8P-201ENST00000515941 111 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 ACA59.2-201ENST00000517061 156 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC025423.5-201ENST00000550230 219 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 ZNF519P2-201ENST00000557032 169 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC008121.1-201ENST00000603244 268 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AC064836.2-201ENST00000609491 462 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 AL359851.1-201ENST00000569460 4997 ntBASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.87□□□□□ -2.11
TRIM49D1C9J1S8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC080128.1-201ENST00000474389 1917 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-877P-201ENST00000383868 107 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 SNORA32.2-201ENST00000384049 122 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-831P-201ENST00000384548 107 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-220P-201ENST00000390919 107 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AL356776.1-201ENST00000406574 447 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AL627311.1-201ENST00000431514 115 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-189P-201ENST00000516120 101 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC103996.1-201ENST00000555468 102 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 ELOCP5-201ENST00000604924 333 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-85P-201ENST00000605989 107 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 DISC2.1-201ENST00000612827 205 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 U6atac.1-201ENST00000616025 117 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 AC002553.4-201ENST00000616896 331 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 RMST_7.1-201ENST00000621935 268 ntBASIC1.86□□□□□ -2.11
TRIM49D1C9J1S8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms