Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC146507.2-201ENST00000460608 476 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 RN7SL504P-201ENST00000494496 287 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 MIR4513-201ENST00000581077 86 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 MIR3199-1-201ENST00000582434 88 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 MIR4325-201ENST00000583049 90 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AL034555.1-201ENST00000604816 211 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AC016925.2-201ENST00000605108 242 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AC100812.1-201ENST00000607622 580 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AC040896.1-201ENST00000613819 479 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AC083806.3-201ENST00000614016 455 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AC007485.1-201ENST00000616755 206 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 SNORA50A-202ENST00000629536 136 ntBASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MBD3L4A6NDZ8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 RNA5SP374-201ENST00000362939 125 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 Y_RNA.202-201ENST00000364083 110 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 MIR218-1-201ENST00000384999 110 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 SNORA26.3-201ENST00000391119 136 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 MTCYBP2-201ENST00000407745 171 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC126124.2-201ENST00000413542 321 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 MCFD2P1-201ENST00000417812 300 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 RPS4XP2-201ENST00000458402 793 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AL121594.1-201ENST00000475906 575 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC109925.1-201ENST00000478069 331 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 HMGB1P35-201ENST00000503360 598 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 RPL23AP94-201ENST00000512518 302 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 RNU6-567P-201ENST00000516746 107 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 RNU7-4P-201ENST00000516961 62 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC107934.2-201ENST00000518653 310 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC010928.2-201ENST00000588017 287 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC010620.2-201ENST00000600135 313 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AC092447.9-201ENST00000603395 144 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AL078605.1-201ENST00000603529 500 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 Z98751.3-201ENST00000604447 521 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AL670379.2-201ENST00000604983 252 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 U7.8-201ENST00000619968 63 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 AL450472.1-202ENST00000637286 180 ntBASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
MBD3L4A6NDZ8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AC093908.1-201ENST00000623125 8092 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 Y_RNA.28-201ENST00000362554 111 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 RNU5B-2P-201ENST00000363036 113 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 Y_RNA.148-201ENST00000363557 117 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 Y_RNA.364-201ENST00000365532 101 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 RNY1P14-201ENST00000384426 108 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AC012306.1-201ENST00000423267 114 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 EIF4EP4-201ENST00000424916 578 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AIMP1P2-201ENST00000425294 312 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 MTND4P19-201ENST00000446659 478 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 RNU7-87P-201ENST00000459343 62 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 RNU7-169P-201ENST00000459456 61 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AC073901.1-201ENST00000462471 408 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AC140059.1-201ENST00000489238 361 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AC104581.2-201ENST00000572227 430 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 MIR4738-201ENST00000579134 87 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AL162713.1-201ENST00000604480 262 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AL355802.3-201ENST00000607571 545 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 AL365361.1-201ENST00000566942 3481 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 ZNF826P-207ENST00000622273 1910 ntBASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MBD3L4A6NDZ8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MBD3L4A6NDZ8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MBD3L4A6NDZ8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MBD3L4A6NDZ8 Y_RNA.39-201ENST00000362620 98 ntBASIC2.92□□□□□ -1.94
MBD3L4A6NDZ8 RNU6-1159P-201ENST00000362933 107 ntBASIC2.92□□□□□ -1.94
MBD3L4A6NDZ8 RNY3P11-201ENST00000364153 102 ntBASIC2.92□□□□□ -1.94
MBD3L4A6NDZ8 SNORA68.1-201ENST00000364537 132 ntBASIC2.92□□□□□ -1.94
MBD3L4A6NDZ8 Y_RNA.605-201ENST00000410577 105 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms