Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Y_RNA.571-201ENST00000384753 98 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 RPL23AP48-201ENST00000406913 488 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 RNA5SP201-201ENST00000410316 124 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 RNU2-37P-201ENST00000410695 177 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AC023141.4-201ENST00000412031 328 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 BMS1P22-201ENST00000414726 313 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 BTF3P11-201ENST00000426582 477 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 RNU7-23P-201ENST00000459465 62 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AC103975.1-201ENST00000482506 483 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AC009127.3-201ENST00000570531 403 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AC012493.2-201ENST00000595083 291 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 DEFB117-201ENST00000602356 141 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AL138880.2-201ENST00000616214 239 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 MIR7641-1-201ENST00000627518 61 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 AL034408.1-202ENST00000636088 415 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 MFSD8-242ENST00000641690 4199 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHISA3A0PJX4 Y_RNA.7-201ENST00000362352 102 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 RNU6-727P-201ENST00000363592 107 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 MIR549A-201ENST00000385268 96 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 AL451074.5-201ENST00000415894 435 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 AC006011.1-201ENST00000442758 349 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 AL500522.2-201ENST00000448562 343 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 AL162591.2-201ENST00000449634 317 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 RN7SL354P-201ENST00000469282 294 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.54□□□□□ -1.84
SHISA3A0PJX4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHISA3A0PJX4 RNU6-344P-201ENST00000516635 111 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 RNU2-12P-201ENST00000517216 168 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 AP002001.1-203ENST00000534002 267 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 AC022655.2-201ENST00000577280 318 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 IPO5P1-202ENST00000600039 287 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 AL008718.3-201ENST00000610217 321 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 LINC02471-203ENST00000641941 4752 ntBASIC3.54□□□□□ -1.84
SHISA3A0PJX4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC010680.1-201ENST00000590024 3590 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 MIR423-201ENST00000362201 94 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 RNU6-312P-201ENST00000364629 107 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 Y_RNA.272-201ENST00000364696 102 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 SNRPGP5-201ENST00000456003 220 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC005840.1-201ENST00000498412 377 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 HMGB3P3-201ENST00000510526 400 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC025946.2-201ENST00000603398 234 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 SNORD11B-201ENST00000607707 90 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AL353746.1-201ENST00000566293 6881 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 AC006504.1-201ENST00000562493 3666 ntBASIC3.53□□□□□ -1.84
SHISA3A0PJX4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.53□□□□□ -1.84
SHISA3A0PJX4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 SNORD114-19-201ENST00000363072 75 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 RNU4-17P-201ENST00000365598 141 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 MIR141-201ENST00000384975 95 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 RNU5E-9P-201ENST00000411164 104 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 AC009220.1-201ENST00000451614 275 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 RNA5SP49-201ENST00000516450 115 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 SUMO2P18-201ENST00000518873 252 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 TGIF1P1-201ENST00000558095 802 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 MIR4284-201ENST00000578924 81 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 AC011471.1-201ENST00000585766 187 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 FAM27D1-201ENST00000612308 341 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 AL078604.3-201ENST00000615580 211 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 AC005562.2-201ENST00000618264 111 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 AP005019.3-201ENST00000620418 560 ntBASIC3.52□□□□□ -1.85
SHISA3A0PJX4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms