Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AP002782.1-201ENST00000623107 614 ntBASIC0.53□□□□□ -2.32
TRBV6-4A0A1B0GX49 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
TRBV6-4A0A1B0GX49 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.53□□□□□ -2.33
TRBV6-4A0A1B0GX49 Y_RNA.46-201ENST00000362695 102 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-1179P-201ENST00000384667 107 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 MIR544A-201ENST00000384855 91 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-1176P-201ENST00000390955 107 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 MTCO3P41-201ENST00000414801 328 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 Z73417.1-201ENST00000447373 778 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 ACA64.5-201ENST00000516207 127 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC123904.2-201ENST00000548059 300 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 MTND4LP25-201ENST00000570218 163 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 MIR3664-201ENST00000579074 99 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC008088.1-201ENST00000580993 280 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 MIR548AC-201ENST00000585049 88 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC068620.3-201ENST00000602749 560 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 BNIP3P10-201ENST00000605360 577 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 MIR3976-201ENST00000606807 139 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-87P-201ENST00000607561 108 ntBASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.52□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-78P-201ENST00000362897 107 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-1285P-201ENST00000363480 105 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 SNORD114-27-201ENST00000363766 70 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-1019P-201ENST00000364424 107 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 SNORD116.1-201ENST00000365628 92 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 HMGN1P14-201ENST00000412459 517 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC013410.2-201ENST00000422627 201 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 MTND4P20-201ENST00000424125 869 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AF131216.2-201ENST00000512316 564 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 MTND3P5-201ENST00000512798 333 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU1-86P-201ENST00000516108 154 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU2-10P-201ENST00000516375 211 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 RN7SKP265-201ENST00000516448 223 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 SCARNA16.2-201ENST00000516520 172 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU1-107P-201ENST00000516617 154 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 SNORD60.2-201ENST00000516883 86 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNA5SP503-201ENST00000517047 117 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL391646.1-201ENST00000603860 190 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL158032.1-201ENST00000605401 106 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC008945.2-201ENST00000606056 604 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC144521.1-201ENST00000607148 956 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC092106.3-201ENST00000611308 722 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC083806.3-201ENST00000614016 455 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC106800.4-201ENST00000614905 153 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL359547.2-201ENST00000615810 418 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC068647.2-201ENST00000637380 353 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL159152.1-201ENST00000635019 2587 ntBASIC0.51□□□□□ -2.33
TRBV6-4A0A1B0GX49 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 MIR373-201ENST00000362273 69 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 Y_RNA.110-201ENST00000363220 99 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNY4P16-201ENST00000364768 94 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU1-36P-201ENST00000365130 165 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-1222P-201ENST00000384615 107 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU4-22P-201ENST00000411058 166 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC006461.1-201ENST00000412637 326 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 MTND5P15-201ENST00000434246 349 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 HSPE1P13-201ENST00000451143 297 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 ATP5J2P3-201ENST00000451550 258 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 snoU13.27-201ENST00000459278 104 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC104806.1-201ENST00000508720 308 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC010587.2-201ENST00000511727 448 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 SNORA19.3-201ENST00000516165 130 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC107934.1-201ENST00000522215 217 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC068587.4-201ENST00000533893 186 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC136932.1-201ENST00000574771 208 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 SNORA59B-202ENST00000578183 701 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL034555.1-201ENST00000604816 211 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC084824.5-201ENST00000612009 413 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-1192P-201ENST00000612197 107 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-489P-201ENST00000618289 107 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC026585.1-201ENST00000619582 524 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC097372.5-201ENST00000623665 376 ntBASIC0.5□□□□□ -2.33
TRBV6-4A0A1B0GX49 AL445523.1-201ENST00000451184 1362 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 SNORA4.1-201ENST00000364263 144 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6-438P-201ENST00000365561 103 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 Y_RNA.465-201ENST00000384293 102 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 MIR100-201ENST00000385259 80 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 AC019070.1-201ENST00000415008 1024 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 POLR2J4-204ENST00000418424 324 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 ARL5AP1-201ENST00000418991 388 ntBASIC0.49□□□□□ -2.33
TRBV6-4A0A1B0GX49 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms