Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SNORA51.11-201ENST00000384442 131 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 RNU1-148P-201ENST00000384472 162 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 SNORD56-201ENST00000413522 71 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AL589823.1-201ENST00000429577 183 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AL121594.1-201ENST00000475906 575 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AL163973.1-201ENST00000484753 577 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AC105313.1-201ENST00000509121 353 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 MTND3P5-201ENST00000512798 333 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AC023050.3-201ENST00000541142 333 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AL118558.2-201ENST00000556294 238 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AC004223.2-201ENST00000590309 544 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 HULC.1-201ENST00000612720 240 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 AL161423.1-201ENST00000613700 262 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 uc_338.34-201ENST00000617467 174 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-428P-201ENST00000362942 107 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-105P-201ENST00000363909 104 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RNU4-40P-201ENST00000364351 143 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.255-201ENST00000364581 97 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RNA5SP190-201ENST00000365222 118 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.399-201ENST00000383955 105 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 MIR95-201ENST00000385072 81 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AL355497.1-201ENST00000406262 551 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RN7SKP158-201ENST00000410453 326 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RNU2-23P-201ENST00000410545 195 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AIMP1P2-201ENST00000425294 312 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 VN1R108P-201ENST00000431580 830 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AL365400.1-201ENST00000431854 640 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RPL30P12-201ENST00000474666 353 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 LRRC34P2-201ENST00000514850 553 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RNU2-53P-201ENST00000516257 147 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AC104383.1-201ENST00000530297 370 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 CYCSP26-201ENST00000534107 320 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AC090115.3-201ENST00000553218 849 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AC103987.3-201ENST00000582071 292 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 RPL30P11-203ENST00000598995 310 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 APOOP1-201ENST00000604695 592 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 MIR6840-201ENST00000611937 71 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 U4atac.1-201ENST00000618345 95 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 AL158209.2-201ENST00000619266 216 ntBASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.88□□□□□ -2.11
SMIM28A0A1B0GU29 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-212P-201ENST00000362642 104 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-336P-201ENST00000364891 107 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.318-201ENST00000365131 97 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 RNA5SP270-201ENST00000411361 118 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AL117339.3-201ENST00000418733 162 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 RNU7-167P-201ENST00000459160 62 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AC083798.1-201ENST00000472671 131 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-1038P-201ENST00000516516 104 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-835P-201ENST00000516974 104 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AP003034.1-201ENST00000534621 422 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 MIR4255-201ENST00000579351 72 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AC078899.2-201ENST00000595282 212 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AC092954.2-201ENST00000609103 430 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AC096772.1-201ENST00000609146 564 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 uc_338.15-201ENST00000615470 191 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AL159153.1-201ENST00000619688 317 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 AL359880.1-201ENST00000621879 266 ntBASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMIM28A0A1B0GU29 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-1042P-201ENST00000384204 107 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-1274P-201ENST00000384557 107 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 MTCO3P40-201ENST00000392516 676 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 MTND1P23-201ENST00000416931 372 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC013470.1-201ENST00000453438 462 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC006026.2-201ENST00000457376 180 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 SNORD13-201ENST00000459299 104 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 snoU13.14-201ENST00000459372 104 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC117503.1-201ENST00000472241 394 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC018868.1-201ENST00000491307 315 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms