Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AC006199.1-201ENST00000548728 219 ntBASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AC092447.9-201ENST00000603395 144 ntBASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AL137790.1-201ENST00000634283 177 ntBASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCDC187A0A096LP49 AC007496.3-201ENST00000624987 3443 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 Y_RNA.151-201ENST00000363566 112 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 SNORA5B-201ENST00000363786 132 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 Y_RNA.380-201ENST00000365663 111 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 RNU6-1062P-201ENST00000383908 107 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 SNORA7.4-201ENST00000384249 137 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 MIR517A-201ENST00000385001 87 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 RNU6-325P-201ENST00000411132 105 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AC245291.1-201ENST00000419501 328 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 USMG5P1-201ENST00000425964 177 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AL365496.1-201ENST00000426885 215 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 TRIAP1P1-201ENST00000427062 225 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 RPS15AP5-201ENST00000436276 388 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 RPL21P2-201ENST00000440049 481 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 RPS27P29-201ENST00000463110 252 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AK3P2-201ENST00000507976 429 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 SNORD116.3-201ENST00000517176 78 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AC103996.1-201ENST00000555468 102 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AC020895.1-201ENST00000595362 272 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AC009314.1-201ENST00000603871 304 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 uc_338.1-201ENST00000612113 180 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 PISRT1.1-201ENST00000616930 107 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 AC138627.2-201ENST00000624202 601 ntBASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC187A0A096LP49 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 RNU1-70P-201ENST00000362618 164 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 Y_RNA.428-201ENST00000384078 102 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 RNU6-842P-201ENST00000384269 107 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 RNU6-933P-201ENST00000384424 107 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 Y_RNA.518-201ENST00000384552 113 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 RNU6-306P-201ENST00000384617 107 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 RNA5SP293-201ENST00000410527 113 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC023141.4-201ENST00000412031 328 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 USP9YP30-201ENST00000430729 455 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 DAP3P1-201ENST00000441522 278 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 U8.21-201ENST00000459536 136 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC008885.1-201ENST00000514930 301 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 RNU6-581P-201ENST00000516214 105 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 RNY3P15-201ENST00000516297 97 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC010186.2-204ENST00000537668 439 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AL606534.2-204ENST00000635008 178 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AC110079.1-202ENST00000635213 138 ntBASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC187A0A096LP49 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RPL9P7-201ENST00000330965 580 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RNU6-428P-201ENST00000362942 107 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RNU6-790P-201ENST00000384479 105 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 SNORA41-201ENST00000384675 132 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 MT-TW-201ENST00000387382 68 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 MIR767-201ENST00000390228 109 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RPS29P13-201ENST00000402041 169 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RNU2-23P-201ENST00000410545 195 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RNU6-55P-201ENST00000411092 107 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AL356968.1-201ENST00000416622 474 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AL513043.1-201ENST00000439124 535 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms