Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 RNU6-39P-201ENST00000384344 107 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 RNU6-83P-201ENST00000384568 112 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 RNU6-906P-201ENST00000384700 70 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 RPL21P90-201ENST00000415692 466 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 AC137499.1-201ENST00000427602 88 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 AC119618.1-201ENST00000434191 222 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 HMGN2P18-201ENST00000450680 270 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 AC091951.3-201ENST00000504093 246 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 MIR5094-201ENST00000578766 85 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 AL157786.1-207ENST00000627771 695 ntBASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.16□□□□□ -2.22
USH1CQ9Y6N9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
USH1CQ9Y6N9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 RNU6-1222P-201ENST00000384615 107 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 SNORA12-201ENST00000391162 147 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 RPL21P111-201ENST00000418453 477 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC007283.2-201ENST00000424739 197 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AL669831.1-202ENST00000428504 417 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC079448.1-201ENST00000449377 373 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC112204.1-201ENST00000502591 103 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 RNU6-902P-201ENST00000517212 91 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 MTND2P7-201ENST00000521337 640 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 SNORA77B-201ENST00000578179 125 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AL031667.3-201ENST00000620124 655 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC131159.1-201ENST00000621854 213 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 MIR8063-201ENST00000621930 81 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC097372.5-201ENST00000623665 376 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AC022513.1-201ENST00000624512 117 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 AP000560.1-201ENST00000624150 1937 ntBASIC1.15□□□□□ -2.23
USH1CQ9Y6N9 RNU6-371P-201ENST00000364283 108 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 SNORA24.1-201ENST00000384401 135 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 EEF1A1P40-201ENST00000412883 573 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AC245517.4-201ENST00000448601 281 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AC010587.1-201ENST00000505809 469 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 RBBP4P6-201ENST00000508098 202 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 MIR5692A1-201ENST00000580523 69 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 BNIP3P8-201ENST00000597863 560 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AL031281.1-201ENST00000604049 488 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AC068205.3-201ENST00000636385 468 ntBASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.14□□□□□ -2.23
USH1CQ9Y6N9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 SNORD32B-201ENST00000364460 84 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 Y_RNA.332-201ENST00000365271 113 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 RNU6-641P-201ENST00000384006 107 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 RNU6-533P-201ENST00000384144 107 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 RNU2-39P-201ENST00000410604 198 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AP000275.1-201ENST00000411943 390 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 MTND4P20-201ENST00000424125 869 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AL589872.1-201ENST00000426602 288 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AL135790.2-201ENST00000437701 267 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 ART2BP-201ENST00000453501 499 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 RNU1-131P-201ENST00000458943 161 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC097473.1-201ENST00000508142 408 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC117522.1-201ENST00000509821 380 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC005741.1-201ENST00000511094 432 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC112206.4-201ENST00000515142 405 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC115990.1-201ENST00000526957 301 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 RRN3P3-201ENST00000549207 578 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC019288.1-201ENST00000557918 224 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms