Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 MED28P2-201ENST00000475771 317 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AC090115.3-201ENST00000553218 849 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AL138889.2-201ENST00000603883 242 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 MIR15A-201ENST00000607334 83 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AP000943.4-201ENST00000622912 357 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AL136313.1-201ENST00000624804 202 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-843P-201ENST00000384454 104 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-1274P-201ENST00000384557 107 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-953P-201ENST00000459154 107 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 MTND1P16-201ENST00000465177 898 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-150P-201ENST00000516237 95 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AP000654.2-201ENST00000605633 586 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AP002802.2-201ENST00000605877 235 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AC009033.1-201ENST00000624279 431 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AL356094.1-201ENST00000624663 1212 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 MIR302D-201ENST00000362275 68 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 RNU5A-8P-201ENST00000364102 114 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-1019P-201ENST00000364424 107 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-1222P-201ENST00000384615 107 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 GTF2IP13-201ENST00000438487 386 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 NDUFB1P2-201ENST00000449477 176 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 RNU1-131P-201ENST00000458943 161 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 AP003355.1-201ENST00000518956 587 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 AC009712.1-201ENST00000564938 316 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 BNIP3P31-201ENST00000604515 566 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 AL391516.1-201ENST00000554380 2449 ntBASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.78□□□□□ -2.28
SCN10AQ9Y5Y9 USP9YP33-201ENST00000412220 421 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 RPL21P111-201ENST00000418453 477 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 MTCYBP5-201ENST00000423752 1135 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 C8orf59P1-201ENST00000429930 303 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 USP9YP35-201ENST00000435696 412 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC243829.6-201ENST00000612652 106 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC012676.2-201ENST00000619258 186 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC099654.8-201ENST00000637757 681 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 Y_RNA.68-201ENST00000362881 102 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-777P-201ENST00000364265 104 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-72P-201ENST00000384285 79 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 SNORA25-201ENST00000384384 134 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 MRPL35P3-201ENST00000421557 364 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC069257.2-201ENST00000441819 155 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC079140.3-201ENST00000511111 550 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-229P-201ENST00000516614 102 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC133485.1-201ENST00000567176 124 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 MIR5094-201ENST00000578766 85 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 BNIP3P26-201ENST00000600827 554 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AP003465.2-201ENST00000602571 373 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC005776.1-201ENST00000603164 290 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC022893.3-201ENST00000607665 437 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AL365434.2-201ENST00000607979 234 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 AC068880.4-201ENST00000623082 495 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 MIR1248-201ENST00000629190 106 ntBASIC0.77□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-23P-201ENST00000363283 107 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 RNU5E-6P-201ENST00000365574 115 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-26P-201ENST00000383985 107 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-1176P-201ENST00000390955 107 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 CR769776.1-201ENST00000441254 787 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC132479.1-201ENST00000449160 144 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC130509.1-201ENST00000464158 433 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC114982.1-201ENST00000469402 321 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC117454.1-201ENST00000491120 168 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC104629.1-201ENST00000494226 508 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC103851.1-201ENST00000506833 274 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AP006587.4-201ENST00000526053 529 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AP000860.1-201ENST00000605250 559 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-438P-201ENST00000365561 103 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-968P-201ENST00000384076 107 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 MIR19B1-201ENST00000384829 87 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 RPL31P3-201ENST00000458430 332 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC134050.1-201ENST00000495088 933 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 SUMO2P5-201ENST00000506790 245 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC005741.1-201ENST00000511094 432 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms